QUARK Ab Initio Results for YNAJ_ECOLI

Submitted Primary Sequence

>Length 85
MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ
HHHHHHCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ
3312313224123000000000000010013000200032120102200100000100000000000100000000010122444
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.634 to 1kd9A SCOP code=h.1.3.1	TM-score=0.608 to 1h2sB SCOP code=f.17.4.1	TM-score=0.670 to 1iseA SCOP code=d.67.3.1	TM-score=0.617 to 1h2sB SCOP code=f.17.4.1	TM-score=0.561 to 1gpjA SCOP code=a.151.1.1

Estimated TM-score of Model 1: 0.4511 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4963 ±0.0778