QUARK Ab Initio Results for YMGD_ECOLI

Submitted Primary Sequence

>Length 109
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK
CHHHHHHHHHHHHHHHHHHHHCCTTTTCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHTTTTCCCCCCCCCHHHHHHHHHHHHCTTTTEEEHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK
5320011001000001100321303320111000001202211322211002001111202121231313323412230022012003411200001001110222255
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.554 to 1lq7A SCOP code=k.9.1.1	TM-score=0.479 to 1x9zA SCOP code=d.292.1.1	TM-score=0.528 to 1gntA SCOP code=e.26.1.1	TM-score=0.533 to 1sxjB SCOP code=a.80.1.1	TM-score=0.510 to 1taeA SCOP code=d.142.2.2

Estimated TM-score of Model 1: 0.3506 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3888 ±0.0778