QUARK Ab Initio Results for YMGC_ECOLI


  Submitted Primary Sequence

>Length 82
MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS
CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS
5543123211010100220132001220112121002003121331122000200120030022232202201122332225
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.540 to 1zoqC
SCOP code=a.153.1.1
TM-score=0.598 to 1m12A
SCOP code=a.64.1.1
TM-score=0.579 to 2aplA
SCOP code=a.258.1.1
TM-score=0.556 to 1m12A
SCOP code=a.64.1.1
TM-score=0.543 to 1wpbP
SCOP code=a.233.1.1
Estimated TM-score of Model 1: 0.5419 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5935 ±0.0778