QUARK Ab Initio Results for YMFI_ECOLI

Submitted Primary Sequence

>Length 113
MNQFYVHVRLFEDTAEQTKKFEELMLNFLYQKTVKESDDSCCRLIPEGYILKSTMNCQQILDQTFSIANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHYDLTPKPIKLDS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNQFYVHVRLFEDTAEQTKKFEELMLNFLYQKTVKESDDSCCRLIPEGYILKSTMNCQQILDQTFSIANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHYDLTPKPIKLDS
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTTTTEEEECCCHHHHHHHHHHHHHTTTTCCEEEETTTTTTCEECCHHHHHCCCCEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNQFYVHVRLFEDTAEQTKKFEELMLNFLYQKTVKESDDSCCRLIPEGYILKSTMNCQQILDQTFSIANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHYDLTPKPIKLDS
54310010100321131132022001101023103322320031023000011211022002200200221212000000203320000100201122001121223223245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.488 to 1nvpB SCOP code=a.32.1.1	TM-score=0.506 to 1kmmC SCOP code=c.51.1.1	TM-score=0.475 to 1ni3A SCOP code=c.37.1.8	TM-score=0.476 to 1kd9A SCOP code=h.1.3.1	TM-score=0.459 to 1q2hA SCOP code=a.34.4.1

Estimated TM-score of Model 1: 0.3109 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3464 ±0.0778