QUARK Ab Initio Results for YJDK_ECOLI

Submitted Primary Sequence

>Length 98
MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK
TTTTTTTTEEEEETTTTTCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHTTTTEEEHHHHHHHHHHHHHHHHCCCCCCCTTTTEEEEHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK
55442322110000212211110001012001202011000221202231242200001200121011001020030230301000000221032125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.579 to 2iu5A SCOP code=a.4.1.9	TM-score=0.493 to 1qzmA SCOP code=c.37.1.20	TM-score=0.512 to 1lq7A SCOP code=k.9.1.1	TM-score=0.545 to 1knvB SCOP code=c.52.1.7	TM-score=0.582 to 1v74B SCOP code=a.24.20.1

Estimated TM-score of Model 1: 0.3551 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3937 ±0.0778