QUARK Ab Initio Results for YJBE_ECOLI

Submitted Primary Sequence

>Length 80
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ
CCCEEEHHHHHHHHHHHHCCCCCETTTTTTTTTTEEEETTTTTTEEEEEHHHHHHHHEETTTTTTTTTTTTEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80

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Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ
55310001100000001112101010131212111101122321210100120000000011112122202211222234
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.546 to 2iecD SCOP code=d.316.1.1	TM-score=0.495 to 1b24A SCOP code=d.95.2.1	TM-score=0.466 to 2fugQ SCOP code=d.82.2.2	TM-score=0.478 to 2cfxA SCOP code=a.4.5.32	TM-score=0.451 to 1cpzA SCOP code=d.58.17.1

Estimated TM-score of Model 1: 0.3089 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3441 ±0.0778