QUARK Ab Initio Results for YIFE_ECOLI


  Submitted Primary Sequence

>Length 112
MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD
CHHHHTTTTCCCCCCCTTTTCCTTTTTCHHHHHHHHHHHHHHHHHHCTTTTCCCHHHHHHHHHTTTTCTTTTHHHHHHHHHHHHTTTTCEEETTTTTTTTCCCCCCCTTTTC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD
5542121223112232012001221201131020022001002202313322223312100120313433213012000200321332220000111313232233223345
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.447 to 1fkqA
SCOP code=d.2.1.2		 TM-score=0.467 to 1c9bA
SCOP code=a.74.1.2		 TM-score=0.446 to 2o3lA
SCOP code=a.69.4.1		 TM-score=0.444 to 1g1eB
SCOP code=a.59.1.1		 TM-score=0.478 to 2okcB
SCOP code=c.66.1.45
Estimated TM-score of Model 1: 0.3371 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3743 ±0.0778