QUARK Ab Initio Results for YIDI_ECOLI

Submitted Primary Sequence

>Length 149
MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPPPTFESIVADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILNQSGIALAIAALLCAFIGGMRKENRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPPPTFESIVADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILNQSGIALAIAALLCAFIGGMRKENRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV
CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTTCCTTTTTTTHHHHHHHHHHHHHHHTTTTTTTCCCCCCCCCCCCHHHHHHTTTTHHHHHHHHHHHTTTTTHHTTTTCCEEEEETTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPPPTFESIVADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILNQSGIALAIAALLCAFIGGMRKENRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV
44222212110001000000000000001101121222202200121012012000120313312223333313022002211000000000000011123312210100000110000010001000000000000001111222324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.519 to 3lynB SCOP code=a.19.1.1	TM-score=0.491 to 1yuwA SCOP code=b.130.1.1	TM-score=0.495 to 2pmrA SCOP code=a.8.11.1	TM-score=0.541 to 1dowA SCOP code=a.24.9.1	TM-score=0.507 to 1hzfA SCOP code=a.102.4.4

Estimated TM-score of Model 1: 0.3363 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3735 ±0.0778