QUARK Ab Initio Results for YHHH_ECOLI

Submitted Primary Sequence

>Length 127
MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSDQIAGGVFIIEIGKNDGRILNFGHGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSDQIAGGVFIIEIGKNDGRILNFGHGK
CCCHHHHHHHHHHHHCCEEEEEEEETTTTHHHTTTTEEEEEEEETTTTTEEEEEECCHHHHHHHHHHEEEEHHCHHHHHHCCCEEETTTTTTEEEECCCTTTTTTTTEEEEEETTTTTCEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSDQIAGGVFIIEIGKNDGRILNFGHGK
5531002101100132000000000012012203430200221223232102000322210120110001211132013423111012122000020222233221000001002430300100236
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.461 to 1pflA SCOP code=d.110.1.1	TM-score=0.501 to 2a0aA SCOP code=b.60.1.2	TM-score=0.486 to 2a0aA SCOP code=b.60.1.2	TM-score=0.475 to 1mszA SCOP code=d.68.7.1	TM-score=0.414 to 1snxA SCOP code=d.144.1.7

Estimated TM-score of Model 1: 0.3002 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3349 ±0.0778