QUARK Ab Initio Results for YHDN_ECOLI

Submitted Primary Sequence

>Length 122
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN
HHHHHHHHHHHHHHHHHCTTTTTTTTTTTCCCTTTTTTTCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN
35202210221012023313132021201102233112012102000200231200031021122023013103203333331230031012011103212222320112002201331344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.523 to 2eyqA SCOP code=b.34.18.1	TM-score=0.564 to 1sxjB SCOP code=a.80.1.1	TM-score=0.502 to 2aplA SCOP code=a.258.1.1	TM-score=0.504 to 1qkuA SCOP code=a.123.1.1	TM-score=0.543 to 2o3lA SCOP code=a.69.4.1

Estimated TM-score of Model 1: 0.4319 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4758 ±0.0778