QUARK Ab Initio Results for YGDB_ECOLI

Submitted Primary Sequence

>Length 135
MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWGKMHCWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSLWRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWGKMHCWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSLWRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWGKMHCWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSLWRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP
552210010000000000000000011023211220100021001000000000000000122321210100000000000000000000000323211200000000000000000000022333222445555
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.538 to 2iu5A SCOP code=a.4.1.9	TM-score=0.619 to 1fbvA SCOP code=a.39.1.7	TM-score=0.607 to 1h2sB SCOP code=f.17.4.1	TM-score=0.589 to 1h2sB SCOP code=f.17.4.1	TM-score=0.542 to 1q2hA SCOP code=a.34.4.1

Estimated TM-score of Model 1: 0.4213 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4645 ±0.0778