QUARK Ab Initio Results for YGAH_ECOLI

Submitted Primary Sequence

>Length 111
MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII
CCHHHHHHHHHHHHHHHHHHHCTTTTTTTTTTTTTTTTTTHHHHHHHHHHHHHHHHHCCCCHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII
552100000000000000021000202222232234111010010000000000000120131132032001100000000000021221000000000000000200122
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.638 to 1tqgA SCOP code=a.24.10.3	TM-score=0.625 to 1fbvA SCOP code=a.39.1.7	TM-score=0.700 to 2rldA SCOP code=a.29.16.1	TM-score=0.593 to 1w27A SCOP code=a.127.1.2	TM-score=0.625 to 1hs7A SCOP code=a.47.2.1

Estimated TM-score of Model 1: 0.3748 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4147 ±0.0778