QUARK Ab Initio Results for YFFN_ECOLI

Submitted Primary Sequence

>Length 122
MKHVFKYLDFAEDREHAESVATKELKLDHVEKFAIRDLANDIKERGCVELVQPGGFDELVQIYEAGGDGIEPLNCGIESRKVAIAALLRVMREPDFQCLEMVHEIIRIARDLEAPVDAPLDC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKHVFKYLDFAEDREHAESVATKELKLDHVEKFAIRDLANDIKERGCVELVQPGGFDELVQIYEAGGDGIEPLNCGIESRKVAIAALLRVMREPDFQCLEMVHEIIRIARDLEAPVDAPLDC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCTTTTCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKHVFKYLDFAEDREHAESVATKELKLDHVEKFAIRDLANDIKERGCVELVQPGGFDELVQIYEAGGDGIEPLNCGIESRKVAIAALLRVMREPDFQCLEMVHEIIRIARDLEAPVDAPLDC
45201210211102310220012201021012000210021035310010022110210020021113112102010211100000002013212120020011002002203121313232
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.573 to 2hguK SCOP code=d.99.1.1	TM-score=0.606 to 1g2cO SCOP code=h.3.2.1	TM-score=0.593 to 1gk7A SCOP code=h.1.20.1	TM-score=0.597 to 1ik7A SCOP code=a.77.1.2	TM-score=0.581 to 1gk7A SCOP code=h.1.20.1

Estimated TM-score of Model 1: 0.4178 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4607 ±0.0778