QUARK Ab Initio Results for YFDP_ECOLI

Submitted Primary Sequence

>Length 120
MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH
CCTTTTCCHHHHHHHTTTTHHHHHHHHHHHHHHHHHTTTTTTEEEEEEEEEETTTTTTEEEEEEEEECCTTTTCCCTTTTTTTTTEEETTTTTTTECHHHHHHTTTTTTTTTTTEETTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH
553332331310002011100111001001200100122332020102010221433202020101122323424223322230100014202000033112210322123313231224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.502 to 1vj7A SCOP code=a.211.1.1	TM-score=0.460 to 3bzkA SCOP code=a.60.2.6	TM-score=0.434 to 1g55A SCOP code=c.66.1.26	TM-score=0.493 to 1pu1A SCOP code=d.266.1.1	TM-score=0.453 to 1iahB SCOP code=d.144.1.5

Estimated TM-score of Model 1: 0.3503 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3885 ±0.0778