QUARK Ab Initio Results for YDHI_ECOLI

Submitted Primary Sequence

>Length 78
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW
CEEEETTTTTTHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHHHHHHHHHHC
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW
321121222110210010021100100100000000000001001000120200010000000000000000001122
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.627 to 2pmrA SCOP code=a.8.11.1	TM-score=0.603 to 1k30A SCOP code=c.112.1.1	TM-score=0.648 to 1dowA SCOP code=a.24.9.1	TM-score=0.596 to 1h2sB SCOP code=f.17.4.1	TM-score=0.562 to 2ojeD SCOP code=a.202.1.1

Estimated TM-score of Model 1: 0.5048 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5538 ±0.0778