QUARK Ab Initio Results for YDFV_ECOLI

Submitted Primary Sequence

>Length 101
MSLQVSHYNMLRASHEGSQKVVVRTVITVRFVPGAAIAKSILYCAGQLVFKESGHHLTGTDTIYFVTVRLHMHNSTYSSIFCFSMSVLLSRRRVSGDLTCR
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSLQVSHYNMLRASHEGSQKVVVRTVITVRFVPGAAIAKSILYCAGQLVFKESGHHLTGTDTIYFVTVRLHMHNSTYSSIFCFSMSVLLSRRRVSGDLTCR
CCEEHHHHHHHHHHTTTTCEEEEEEEEEEEETTTTHHHHHHHHTTTTEEEECCTTTTCCTTTTEEEEEEEEECCCCEEEEEEEEEEEEEEECCTTTTCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLQVSHYNMLRASHEGSQKVVVRTVITVRFVPGAAIAKSILYCAGQLVFKESGHHLTGTDTIYFVTVRLHMHNSTYSSIFCFSMSVLLSRRRVSGDLTCR
43110111110222232222000100000200210100100010111000231223021221000000101123221000000000000123423232216
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.422 to 1qtpA SCOP code=b.1.10.1	TM-score=0.426 to 1bylA SCOP code=d.32.1.2	TM-score=0.411 to 2oq0C SCOP code=b.40.16.1	TM-score=0.414 to 1dc1B SCOP code=c.52.1.11	TM-score=0.425 to 1r1bA SCOP code=a.16.1.3

Estimated TM-score of Model 1: 0.3150 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3507 ±0.0778