QUARK Ab Initio Results for YDDJ_ECOLI

Submitted Primary Sequence

>Length 111
MQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQMNIKVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQMNIKVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF
CEEEEETTTTHHHHHCCCCEEETTTTEEEECCCCCCCCCEEEEEHHHCCCTTTTEECCHHHHHHHHCCETTTTCHHHHTTTTCCCHHHHHHHHHCCHHHHTTTTTTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQMNIKVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF
311000111120021210000002000101131030311001000331011110001311200231302022020220231101121002004421130043212223234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.455 to 1sxjB SCOP code=a.80.1.1	TM-score=0.438 to 1e69A SCOP code=c.37.1.12	TM-score=0.425 to 1owxA SCOP code=d.58.7.1	TM-score=0.451 to 1s3nA SCOP code=d.159.1.7	TM-score=0.442 to 1t9kC SCOP code=c.124.1.5

Estimated TM-score of Model 1: 0.2745 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3074 ±0.0778