QUARK Ab Initio Results for YBBV_ECOLI

Submitted Primary Sequence

>Length 92
MNRPAILKKKAAKDVASVLKIIFLFYLFLIARLKQRYSIREIKRDLWNIRENYSSNAAIAKIYCRKRKASGPGKHLTILPYGWVRFITFPIM
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNRPAILKKKAAKDVASVLKIIFLFYLFLIARLKQRYSIREIKRDLWNIRENYSSNAAIAKIYCRKRKASGPGKHLTILPYGWVRFITFPIM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTTTTTTEEEETTTTCEEEEEECCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRPAILKKKAAKDVASVLKIIFLFYLFLIARLKQRYSIREIKRDLWNIRENYSSNAAIAKIYCRKRKASGPGKHLTILPYGWVRFITFPIM
54232113330131002001000000000001022211032013101202230112000010102333232213201001100000010224
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.591 to 1et1A SCOP code=j.15.1.1	TM-score=0.605 to 1ybzA SCOP code=a.130.1.1	TM-score=0.613 to 1et1A SCOP code=j.15.1.1	TM-score=0.541 to 2r2vA SCOP code=h.1.3.1	TM-score=0.603 to 2hguK SCOP code=d.99.1.1

Estimated TM-score of Model 1: 0.3972 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4387 ±0.0778