QUARK Ab Initio Results for YAFU_ECOLI

Submitted Primary Sequence

>Length 112
MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI
CCCHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEETTTTCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI
5532310121002011100200000000100010010001111121110101012101101011220231020131021003211331331331233211100001323437
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.513 to 1tbxA SCOP code=a.4.5.48	TM-score=0.460 to 1jo5A SCOP code=f.3.1.1	TM-score=0.573 to 1gntA SCOP code=e.26.1.1	TM-score=0.720 to 1h7cA SCOP code=a.7.5.1	TM-score=0.480 to 1pp1X SCOP code=a.206.1.1

Estimated TM-score of Model 1: 0.3865 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4273 ±0.0778