QUARK Ab Initio Results for YAAI_ECOLI

Submitted Primary Sequence

>Length 134
MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIGDD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIGDD
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEETTTTTTTTTEEETTTTTTTCEEEEEECTTTTEEEEEEEEEETTTTCEEEEEEEETTTTTTTTTCETTTTTTTTTCEEEEEEEEEETTTTTTCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIGDD
45211011000000000000021332200000001323223110201103212201020232312011000002134222110101121442422300001233324200110100021332222010101245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.478 to 1d9qB SCOP code=e.7.1.1	TM-score=0.512 to 1uynX SCOP code=f.4.5.1	TM-score=0.485 to 1lshB SCOP code=f.7.1.1	TM-score=0.439 to 2h1tA SCOP code=b.178.1.1	TM-score=0.436 to 1of5B SCOP code=d.17.4.2

Estimated TM-score of Model 1: 0.3375 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3748 ±0.0778