Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSSCCCCCCCSCCCCCCSSSSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCSSSSSSSSCCCCCSSSSSSSCC MDLYSTPAAALDRFVARRLQPRKEFVEKARRALGALAAALRERGGRLGAAAPRVLKTVKGGSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVPGLRLTFPEQSVPGALQFRLTSVDLEDWMDVSLVPA |
1 | 4xq7A | 0.32 | 0.30 | 9.10 | 1.33 | DEthreader | | LY---AS--RLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQE--HFQGQDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQLLDLGLEDLRME-QRVPDALVFTIQTRGTAEPITVTIVPA |
2 | 4s3nA1 | 1.00 | 0.81 | 22.74 | 2.06 | SPARKS-K | | --------------------PRKEFVEKARRALGALAAALRER--------PRVLKTVKGGSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVPGLRLTFPEQSVPGALQFRLTSVDLEDWMDVSLVPA |
3 | 4xq7A | 0.36 | 0.36 | 10.58 | 0.92 | MapAlign | | QELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQG--QDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLELRME-QRVPDALVFTIQTRGTAEPITVTIVPA |
4 | 4xq7A | 0.36 | 0.36 | 10.59 | 0.79 | CEthreader | | QELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQG--QDVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWQSQDLLDLGLEDLRMEQRVPDALVFTIQTRGTAEPITVTIVPA |
5 | 4s3nA | 0.99 | 0.94 | 26.32 | 1.73 | MUSTER | | MDLYSTPAAALDRFVARKLQPRKEFVEKARRALGALAAALRER--------PRVLKTVKGGSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVPGLRLTFPEQSVPGALQFRLTSVDLEDWMDVSLVPA |
6 | 4s3nA | 0.99 | 0.94 | 26.32 | 2.10 | HHsearch | | MDLYSTPAAALDRFVARKLQPRKEFVEKARRALGALAAALRER--------PRVLKTVKGGSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVPGLRLTFPEQSVPGALQFRLTSVDLEDWMDVSLVPA |
7 | 4s3nA1 | 0.99 | 0.81 | 22.56 | 1.70 | FFAS-3D | | --------------------PRKEFVEKARRALGALAAALRE--------RPRVLKTVKGGSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVPGLRLTFPEQSVPGALQFRLTSVDLEDWMDVSLVPA |
8 | 4xq7A | 0.35 | 0.32 | 9.63 | 1.05 | EigenThreader | | QELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQ----DVRVLKVVKVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVLRLIWKTMWLLDLG---LEDLRMRVP---DALVFTIQTRGTAEPITVTIVPA |
9 | 4s3nA | 0.99 | 0.94 | 26.32 | 1.62 | CNFpred | | MDLYSTPAAALDRFVARKLQPRKEFVEKARRALGALAAALRER--------PRVLKTVKGGSSGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSEMRASLESWWQNPVPGLRLTFPEQSVPGALQFRLTSVDLEDWMDVSLVPA |
10 | 4m5dA | 0.12 | 0.11 | 4.03 | 1.17 | DEthreader | | ----KSN-FKQIDELLEQVKLKQKHVLKVEKFLHKLYDILQEI--PDWEENYKKPDISLIGSFALKAGIYQGSSIDTLLTMPLFEDFLRCLHKRSVYLAYLTHHLLILLKDKLSFLQLEYSYDPLLPILRISCSKDNFYKRFSINLLIG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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