Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCCCSCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCSCHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCSSSCCCC AICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFG |
1 | 2ibiA | 0.39 | 0.31 | 9.17 | 1.17 | DEthreader | | AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQLYMRDLHH------------G-SNAHTALVEEFAKLIQTIWTSSNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TLR--------------------LEEDSRIGDLFV |
2 | 2ibiA | 0.34 | 0.32 | 9.48 | 1.51 | SPARKS-K | | AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ----------RLYMRDLH--HGSNAHTALVEEFAKLIQTIWTSSPDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKNPENLDHLPDDEKGRQMYLEREDSRIGDLFV |
3 | 2y6eA | 0.28 | 0.25 | 7.77 | 1.13 | MapAlign | | IQPGCGLGNLGNT-FMNSALQCLSNTAPLTDYFLKDEYEAEI----------NRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNKDANGRPDAVVAK------EAWENHRLRNDSVIVDTFH |
4 | 2y6eA | 0.26 | 0.24 | 7.47 | 0.97 | CEthreader | | QPGLCGLGNLGNT-FMNSALQCLSNTAPLTDYFLKDEYEAEI----------NRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPAKEAWENHRLRNDSVIVDTFH |
5 | 6dgfA1 | 0.35 | 0.30 | 9.08 | 1.86 | MUSTER | | AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS------------NAHTALVEEFAKLIQTIWTSSNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN-------RVDHLPDDEKGRQMWRKYLEREDSRIGD--- |
6 | 6tbmQ | 0.21 | 0.17 | 5.33 | 1.88 | HHsearch | | STGLRGFINMGATCFMSSIVQTIVHNPFVRDYFLSGYHA---------------KCTKKMDTCITCCIDEIFKVFYGTETKGYGPTALLTAAWRVKNSLAGYSEQDAHEFWQFLLDEIHKSDTELHPELD-----------------DTSTCRCITHKTFA |
7 | 6dgfA1 | 0.29 | 0.25 | 7.75 | 2.09 | FFAS-3D | | AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNA-----------HTALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVDHLPDDEKGRQ-------MWRKYLEREDSRIGD--- |
8 | 2ibiA | 0.33 | 0.29 | 8.77 | 1.33 | EigenThreader | | AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL------------HHGSNAHTALVEEFAKLIQTIWTSSPNDVVPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVLDHLPDDEKGRQ------MWRKYLEREDSRIGDLFV |
9 | 5xveA | 0.33 | 0.30 | 8.96 | 1.18 | CNFpred | | AQGLAGLRNLGNTSFMNSILQCLSNTRELRDYCLQRLYMRDL------------HHGSNAHTALVEEFAKLIQTIWTSSNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTL--ENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV |
10 | 6h4hA | 0.20 | 0.16 | 5.18 | 1.17 | DEthreader | | DGWPVGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYS--L----PQN---V--LENCRHKRIMFMQELQYLFALMMGSNRKFVDPSAALDLLKG-AFRSSEEQQQDVSEFTHKLLDWLEDAFQ-LA-VN-V------------NSPRN-KS-ENPMVQLFY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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