Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSSSCCCCSSCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHSSSSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SSVEVDAVHKHYLSLLSYVGCVVSALACLVTIAAYLCSRVPLPCRRKPRDYTIKVHMNLLLAVFLLDTSFLLSEPVALTGSEAGCRASAIFLHFSLLTCLSWMGLEGYNLYRLVVEVFGTYVPGYLLKLSAMGWGFPIFLVTLVALVDVDNYGPIILAVHRTPEGVIYPSMCWIRDSLVSYITNLGLFSLVFLFNMAMLATMVVQILRLRPHTQKWSHVLTLLGLSLVLGLPWALIFFSFASGTFQLVVLYLFSIITSFQGFLIFIWYWSMRLQARGGPSPLKSNSDSARLPISSGSTSSSRI |
1 | 2ks9A | 0.13 | 0.12 | 4.03 | 1.33 | DEthreader | | DNVDVQPAQIVLWAAAYTVIVVTSVVGNVVVMWIILAH--KR-M----RTVTNYFLVNLAFAEASMAAFNTVVNTYEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPLSATATKVVICVIWVLALLLAFPQGYYS-TTE--T-M---------PSRVVCMIEPEKVYHICVTVIYFLPLLVIGYAYTVVGITLWASEDRSAKRKVVKMMIVVVCTFAICWLPFHIFFLLLKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFYEGLEMKSTVYKVSRLETTI-------- |
2 | 5uz7R | 0.17 | 0.15 | 4.80 | 1.92 | SPARKS-K | | AFTPEKLKNAYVLYYLAIVGHSLSIFTLVISLGIFVFFR-------SLGCQRVTLHKNMFLTYILNSMIIIIHLVEV-RRDPVSCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVA-VFTEKQRLRWYYLLGWGFPLVPTTIHAITRAVYFNDN----------------CWLSVETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTMRETHMYLKAVKATMILVPLLGIQFVVF-----PKMLGKIYDYVMHSLIHFQGFFVATIYCFCNNEVQTTVKRQWAQFKIQWNQRWG-------- |
3 | 2ziyA | 0.08 | 0.08 | 2.98 | 0.63 | MapAlign | | -FDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKS-------LQTPANMFIINLAFSDFTFSLVNGLMTISCFLKKWAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWG-AYTLEG-----------VLCNCSFDTTRSNILCMFIGFFGPILIIFFCYFNIVMSVSAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALPLEWVPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKD- |
4 | 4jkvA2 | 0.13 | 0.12 | 3.99 | 0.38 | CEthreader | | QNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADW------RNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREILSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPGKTSYFHLLTWSLPFVLTVAILAVAQVDGD-------------SVSGICFVGYKRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKAASKINETMLRLGIFGFLAFGFVLITFSCHFYNRPSLLVEKINLFAMFGTGIAMSTWVW--TKATLLIWRRTWC------------------- |
5 | 5uz7R | 0.17 | 0.15 | 4.88 | 1.60 | MUSTER | | AFTPEKLKNAYVLYYLAIVGHSLSIFTLVISLGIFVFF-------RSLGCQRVTLHKNMFLTYILNSMIIIIHLVE-VRRDPVSCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVAVFTEKQ-RLRWYYLLGWGFPLVPTTIHAITRAVYF----------------NDNCWLSVETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETMYLKAVKATMILVPLLGIQFVVFP-----KMLGKIYDYVMHSLIHFQGFFVATIYCFCNNEVQTTVKRQWAQFKIQWNQRWG-------- |
6 | 6fj3A | 0.22 | 0.19 | 5.95 | 1.63 | HHsearch | | TNETREREVFDRLGMICTVGYSVSLASLTVAVLILAYFR-------RLHCTRNYIHMHLFLSFMLRAVSIFVMDAVLY--SYAGCRVAVTFFLYFLATNYYWIAVEGLYLHSLIFKAFFSE-KKYLWGFTVFGWGLPAIFVAVWVSVRATLAN----------------TGCWDLSSGNNKWIIQVPILASIVLNFILFINIVRVLATKGERQQYRKLAKSTLVLMPLFGVHYIVFMLTPYTGTLWQVRMHYEMLFNSFQGFFVAIAYCFCNGEVQAEIKKSWSRWTLA-------------- |
7 | 7d76R | 0.35 | 0.30 | 8.86 | 2.91 | FFAS-3D | | -------STVHILTRISQAGCGVSMIFLAFTIILYAFLRLSRE--RFKSEDAPKIHVALGGSLFLLNLAFLVNVGSGSKGSDAACWARGAVFHYFLLCAFTWMGLEAFHLYLLAVRVFNTYFGHYFLKLSLVGWGLPALMVIGTGSANSYGLYTI-----RDRENRTSLELCWFRTMYALYITVHGYFLITFLFGMVVLALVVWKIFTVKERGKNRKKVLTLLGLSSLVGVTWGLAIFTPLGLS----TVYIFALFNSLQGVFICCWFTILYL------------------------------ |
8 | 7d76R | 0.33 | 0.28 | 8.34 | 0.88 | EigenThreader | | ----S---TVHILTRISQAGCGVSMIFLAFTIILYAFLRLSRERF--KSEDAPKIHVALGGSLFLLNLAFLVNVGSGSKGSDAACWARGAVFHYFLLCAFTWMGLEAFHLYLLAVRVFNTYFGHYFLKLSLVGWGLPALMVIGTGSA---NSYGLYTIRDRENRTSLELCWFREGTTMYALYITVGYFLITFLFGMVVLALVVWKIFTLSRATANRKKVLTLLGLSSLVGVTWGLAIFTPLGLST----VYIFALFNSLQGVFICCWFTILYLP----------------------------- |
9 | 5nx2A | 0.19 | 0.16 | 5.11 | 1.47 | CNFpred | | GERSSPEEQLLFLYIIYTVGYALSFSALVIASAILLGFR-------HLHCTRNYIHLNLFASFILRALSVFIKDAALK-QDSLSCRLVFLFMQYCVAANYYWLLVEGVYLYTLLAFSVFS-EQWIFRLYVSIGWGVPLLFVVPWGIVKYL----------------YEDEACWARNSMNYWLIIRLPILFAIGVNFLIFVRVIAIVVS-CKTDIKCRLAKSTLTLIALLATVEVIFAFVMDRGTLRFIKLFTELSFTSFQGLMVAILYCFANNEVQLEF------------------------ |
10 | 2ziyA | 0.07 | 0.06 | 2.58 | 1.17 | DEthreader | | HEFDQVPAVYYSLGIFIGICGIIGCGGNGIVIYLFTKT--KS-LQ----TPANMFIINLAFSDFTFSLVNGPLMISKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWG-AY--TLE---------GVLCNCSFDSTRSNILCMFILFFGPILIIFFCYFNIVMSVSNHEQANAEMRLAKISIVIVSQFLLSWSPYAVVALLWVAAQLPVMFAKA-SAIHNPMIYSVSHPKFEKETEDDKD-AE-TEIPA------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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