Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCSSSSSCCCSSSSCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC MGFWCRMSENQEQEEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGTSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRSTMTVSDAILRYAMSNCGWAQEERQSSSHLAKGDQPKSCCFLPRSGRRSSPSPPPSEEKDHLEVWAPVVDSEVPSLESPTLPPLSSPLCCDFGRPKEGTSTLQSVRRAVGGDHAVPLDPGQLETVLEK |
1 | 4on3A | 0.57 | 0.31 | 9.05 | 2.33 | SPARKS-K | | -------------EEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMAFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNFFNMNNRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRRFP------------------------------------------------------------------------------------------------------------ |
2 | 6h7wB | 0.19 | 0.18 | 5.85 | 1.16 | MapAlign | | -------------ARTFHITVGDPHKVG-DLATSHIVYSVRTKTTSKAYKQPEFEVKRRYRDFLWLYNTLHSNNPGVVVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAHPTLQLDADLKLFLESESFNIDVKHKERKEDDWFHDRRVYLDALENQLKALLKAMDNMVAQRKAMAEAAADFSASLHALSTVELSPTLSGPLDALSELQLAIRDVYERQAQQDVLTFGIIIEEYIRLIGSVKQAFSQRQKAFHSWHSAESELMKKKAA |
3 | 6h7wB | 0.18 | 0.17 | 5.65 | 0.87 | CEthreader | | ------------ARPTFHITVGDPHKVG-DLATSHIVYSVRTKTTSKAYKQPEFEVKRRYRDFLWLYNTLHSNNPGVVVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAHPTLQLDADLKLFLESESFNIDVKHKERKENKFVEQDDWFHDRRVYLDALENQLKALLKAQRKAMAEAAADFSASLHALSTVELSPTLSGPLDALSELQLAIRDVYERQAQQDVLTFGIIIEEYIRLIGSVKQAFSQRQKAFHSWHSAESELMKKKAA |
4 | 6q0xA | 0.14 | 0.13 | 4.32 | 1.12 | EigenThreader | | -------------ADIIIIEEIPER----EGL--LFKHANYLVKHLIPSEERTVVRRY--SDFLWLREILLKRYPFRMIPELPPKRIGSQNADQFLKKRRIGLSRFINLVMKHPKLSNDDLVLTFLTVRTDLTSWRKQFMKMWKKEFAEQWNQAASCIDTSMELWYRITLLLEERNFFETLVDNFSEVTPKLYPVQQNILLSLRSLFERYKIMAANNVVELQRHVELNKEKLESMKGKPDVSGAEYDRIKKIIQKDRRSIIEQSNRAWLI |
5 | 4on3A | 0.58 | 0.32 | 9.15 | 1.39 | MUSTER | | -------------EEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMAFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFFNMNRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRRFP------------------------------------------------------------------------------------------------------------ |
6 | 6h7wB | 0.18 | 0.17 | 5.54 | 2.04 | SPARKS-K | | ------------ARPTFHITVGDPHKVGDLA-TSHIVYSVRTKTTSKAYKQPEFEVKRRYRDFLWLYNTLHSNNPGVVVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAHPTLQLDADLKLFLESESFNIDVKHKERKENKVEQDDWFHDRRVYLDALENQLKAAQRKAMAEAAADFSASLHALSTV----ELSPTLSGPLDALSELQLAIRDVYERQAQQDVLTFGIIIEEYIRLIGSVKQAFSQRQKAFHSWHSAESELMKKKAA |
7 | 4on3A | 0.58 | 0.32 | 9.15 | 2.26 | HHsearch | | -------------EEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMAFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFFNNNRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRRFP------------------------------------------------------------------------------------------------------------ |
8 | 2rakA | 0.17 | 0.15 | 4.99 | 2.26 | HHsearch | | LAKQLYGPMWVYPTSTFDCVVADPRKGSYG-LKSYIEYQLTPTNT-------NRSVNHRYKHFDWLYERLLVKFGAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEK-EWKTGKRRDELAGV-MIFSTMEPEDLDLVEIEQKEAVKAMDDGVKELLTVGQEHWKRCTGP-LPKEYQKIGKALQSLATVFS----SSG--------Y------QGETDLNDAITEAGKAEQPKKDLHFLMECNHEY |
9 | 4on3A | 0.58 | 0.31 | 9.04 | 2.02 | FFAS-3D | | -------------EEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMAFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNFFNMNNRQHVDQRRQGLEDFLRKVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRR-------------------------------------------------------------------------------------------------------------- |
10 | 6h7wB | 0.18 | 0.16 | 5.29 | 1.10 | EigenThreader | | -----------ARPTFHITVGDP--HKVGDLATSHIVYSVRTKTTSKAYKQPEFEVKRRYRDFLWLYNTLHSNNPGVVVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAHPTLQLDADLKLFLESESFNIDVKHKERKENKFVEQDDWFHDRRVYLDALENMVAQRKAMAEAAADFSASLHALSTVELSPTLSGPLDALSELQLAIRDVYERQAQQD------------------VLTFGIIIEEYIRLIGSVKQAFSQRQKAFHSW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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