Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCSSSSSCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSSCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCSSSSCCCCCCCCHHHHHHHCCCSSSCCCCCSSCCCCHHHHHHHHHCCSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MPVVTTDAESETGIPKSLSNEPPSETMEEIEHTCPQPRLTLTAPAPFADETNCQCQAPHEKLTIAQARLGTPADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPDGAWKQMFQERSSRMLQALSPKQSPVSSPTRSRSPSRSPSPTFSWLPLKTSPPSSPKAASASISSMSEGDEDEK |
1 | 6edoA | 0.06 | 0.04 | 1.85 | 0.67 | DEthreader | | -----------------------------------------------------------SRTLFCMSTNYWACSTRMPILIQ--T---SSGKTSMIEYVAK--KTGHKFVRIN---NHEHTD------TY--GV--E----GYWIVLDAPVLELNRLLDDNRPFMLFATQNP-G-R-KHLS-RAFRNRFLEIHFDDIPLIFATLRDLFRWAFREAVGYQQLA---------LVWRCLLAKVLLCGKTTVNIKISIRDVSAMVFDAKLGVYVEALKEKDMIEIAACNYHQVNE-W----LNDAA---IGFSLSFGGGGGGGGGGGGGGGGGGGG-G-----------GGGGGGGGGGGGGGGGGGGG--- |
2 | 3elbA | 0.24 | 0.17 | 5.32 | 2.82 | HHsearch | | ------------------------------------------------------------------------GRRAVRVWCDGCYD-VHYGHSNQLRQARA---GDYLIVGVHTDEEIAKHKGPPVFTQEERYK-VQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRLLWTGVSFKIIQFASGEPQPGETVIYVAGAFLFHIGH---------------VDFLEKVHRLAEYIIAG--LHFDQEVNH---YKGKNYPI-NL-HER-TLSVLACRYVSAPYAVTAE-LLSHFKVDPYQERRGIRQIDSGSNLTTDLIVQRIIT------ |
3 | 4mvdB | 0.80 | 0.55 | 15.47 | 1.50 | SPARKS-K | | ---------------------------------------GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDL---WEEKSREFIGSFLEMFGP-------------------------------------------------------------------------- |
4 | 4mvdB | 0.60 | 0.40 | 11.42 | 1.16 | MapAlign | | -------------------------------------------PAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIV----------------------RDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLWEEKSREFIGSFLE----------------------------------------------------------- |
5 | 4mvdB | 0.80 | 0.55 | 15.47 | 1.00 | CEthreader | | ---------------------------------------GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDL---WEEKSREFIGSFLEMFGP-------------------------------------------------------------------------- |
6 | 4mvdB | 0.75 | 0.51 | 14.59 | 1.52 | MUSTER | | ---------------------------------------GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLWEEKSREFIGSFL---EMFGP-------------------------------------------------------------------------- |
7 | 4mvdB | 0.80 | 0.55 | 15.47 | 5.40 | HHsearch | | ---------------------------------------GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDL---WEEKSREFIGSFLEMFGP-------------------------------------------------------------------------- |
8 | 4mvdB | 0.79 | 0.54 | 15.32 | 2.30 | FFAS-3D | | ---------------------------------------GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEK---SIDLWEEKSREFIGSFLEMFGP-------------------------------------------------------------------------- |
9 | 4mvdB | 0.67 | 0.45 | 12.90 | 1.08 | EigenThreader | | ---------------------------------------GLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHIPYSSAGSDDVYKHIKEA--GMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDL----------------------WEEKSRE----FIGSFLEMFGP--------------------------------------------------- |
10 | 4mvdA | 0.81 | 0.54 | 15.31 | 1.81 | CNFpred | | -------------------------------------------PAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQR--TAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLI--WEEKSREFIGSFLEMFGP-------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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