>Q9Y4X3 (112 residues) MKGPPTFCSLLLLSLLLSPDPTAAFLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADG DCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG |
Sequence |
20 40 60 80 100 | | | | | MKGPPTFCSLLLLSLLLSPDPTAAFLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG |
Prediction | CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHSSSSSSCCCCCCCCSSSSSSCCCSSSSCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC |
Confidence | 9998525899999999737844456787634642310146788899863217899963898884179999658357617998899999999998743788888977743149 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MKGPPTFCSLLLLSLLLSPDPTAAFLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG |
Prediction | 8754432110000101112445443434334510241245414450153045141353645050400101046351203263530450156266456164461434245648 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHSSSSSSCCCCCCCCSSSSSSCCCSSSSCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC MKGPPTFCSLLLLSLLLSPDPTAAFLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG | |||||||||||||||||||
1 | 6xwxA | 0.05 | 0.04 | 2.02 | 0.83 | DEthreader | RKACELMVLYFLRNAVEIIFHLVKVPWEARTQLTQMFDLSFYEESTHDAVILAH-------------TFL-----RILEASRKDFKRFAARFT--P-QGVDTFVTFTKYYLD | |||||||||||||
2 | 2kumA | 1.00 | 0.79 | 22.00 | 3.24 | SPARKS-K | ------------------------FLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG | |||||||||||||
3 | 6cwsA | 0.36 | 0.24 | 7.18 | 0.89 | MapAlign | -------------------------------SCCTEVSH-HISRRLLERVNMCRIQRADGDCDLAAVILHVKRRRICVSPHNHTVKQWMKVQAAKKNGKGNVCHRKK----- | |||||||||||||
4 | 6cwsA | 0.33 | 0.26 | 7.79 | 0.82 | CEthreader | ----------------------SEAILPIASSCCTEVSHH-ISRRLLERVNMCRIQRADGDCDLAAVILHVKRRRICVSPHNHTVKQWMKVQAAKKNGKGNVCHRKKHHGKR | |||||||||||||
5 | 2kumA | 1.00 | 0.79 | 22.00 | 2.20 | MUSTER | ------------------------FLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG | |||||||||||||
6 | 2kumA | 1.00 | 0.79 | 22.00 | 2.30 | HHsearch | ------------------------FLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG | |||||||||||||
7 | 2kumA | 1.00 | 0.78 | 21.75 | 1.38 | FFAS-3D | -------------------------LLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG | |||||||||||||
8 | 2kumA | 1.00 | 0.79 | 22.00 | 0.68 | EigenThreader | ------------------------FLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG | |||||||||||||
9 | 2kumA | 1.00 | 0.79 | 22.00 | 2.13 | CNFpred | ------------------------FLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG | |||||||||||||
10 | 3prxB | 0.05 | 0.04 | 2.02 | 0.83 | DEthreader | VAMESGIDISSVKTKFYGLL--NKICAG--CSSL--NHQERIDPLQIEKAVYVYKTKLLRKVNDDYLIWGSKNTWIERWPHCDDFAQFSYTLTEFG--C------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |