Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCHHHHHHHHHHCCCSSSSCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCSSSSSSSSSCCHHHHHHHHHCCCCCCSSSSSSSCHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCSSSSSHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHCCCC MSRSPQRALPPGALPRLLQAAPAAAPRALLPQWPRRPGRRWPASPLGMKVFRRKALVLCAGYALLLVLTMLNLLDYKWHKEPLQQCNPDGPLGAAAGAAGGSWGRPGPPPAGPPRAHARLDLRTPYRPPAAAVGAAPAAAAGMAGVAAPPGNGTRGTGGVGDKRQLVYVFTTWRSGSSFFGELFNQNPEVFFLYEPVWHVWQKLYPGDAVSLQGAARDMLSALYRCDLSVFQLYSPAGSGGRNLTTLGIFGAATNKVVCSSPLCPAYRKEVVGLVDDRVCKKCPPQRLARFEEECRKYRTLVIKGVRVFDVAVLAPLLRDPALDLKVIHLVRDPRAVASSRIRSRHGLIRESLQVVRSRDPRAHRMPFLEAAGHKLGAKKEGVGGPADYHALGAMEVICNSMAKTLQTALQPPDWLQGHYLVVRYEDLVGDPVKTLRRVYDFVGLLVSPEMEQFALNMTSGSGSSSKPFVVSARNATQAANAWRTALTFQQIKQVEEFCYQPMAVLGYERVNSPEEVKDLSKTLLRKPRL |
1 | 4goxA | 0.17 | 0.09 | 2.84 | 1.72 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------------------QKPDHKNPNPIAFILSSPRSGSTLLRVMLAGHPGLYSPPELHETMGDRHQELGLSHLGEGLQRALMDLENLTPEASQAK------------------------------------------VNQWVKANTPIADIYAYLQRQAEQRLL-IDKSPSYRHILDHSEILFDQAKYIHLVRHPYAVIESFTRL--------------------------------------RMDNPYALAESIWRTSNRNILDLGRTV------GADRYLQVIYEDLVRDPRKVLTNICDFLGVDFDEALLNP-YSGDRLTDVGDPNFLQHKTIDPALADKWRSITLPAALQLDTI---QLAETFAYDL-------------------- |
2 | 2z6vA | 0.12 | 0.08 | 2.95 | 1.08 | SPARKS-K | | NITTADDVFKLAAQRTGLSEIDSDSWREGLALIVDEVNTSPVFTPFGRQRVLDDATNALGRRLQVHAYIQDH-----------------------------------------------------------------PEVLDAPVER------------------PLIVLGMPRTGTTVISYLLDQDPARRSL--LHWQCVHPIPPASTETLDPRCLALLDEQRKILDAVTRAKMPLPHWEDADGPFIHNQDFKGLSWDSFLPTDRYARWLFDEAD---MSSTYEYQKRYLQVLQSTAPGSWSLKSHSVHIEALLKVFP----DARLIWAHRDPYKATGSLCNLWR--------------------LPQSLVMNTELLD--------QTEMGRLAMWQMRYHVDRPLRAREIGD---ERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAHHPQALNAYRLD-----------EYGLTV---EALQPIFAEYLDTFDIELEGR----------------- |
3 | 3ap1A | 0.18 | 0.09 | 3.02 | 1.10 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------------------LVMVVEYRYGKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEET-------------RIIPRVLAMRQAWSKS---------------------------------------GREKLRLDEA--GVTDEVLDAAMQAFILEVIAKHGARVLCNKDPFTLKSSVYLSRLFP-NSKFLLMVRDGRASVHSMITRKVTI--------------------------------AGFDLSSYRDCLTKWNKAIEVMYAQCMEVG------KEKCLPVYYEQLVLHPRRSLKLILDFLGIAWSDAVLHHEDGGVSLSKIERSTDQVIKPVNLEALSKWTGHIPGDVVRDMAQIA-PMLAQLGYD-------PYANPPNYGNPDPF |
4 | 2z6vA | 0.11 | 0.07 | 2.46 | 1.47 | CNFpred | | --------------------------------------------------FGRQRVLDDATNALGRRLQVHAYIQDHP--------------------------------------------------------------------EVLDAPV----------ERPLIVLGMPRTGTTVISYLLDQDPARRSLLHWQCVHPIPPASTETLRTDPRCLALLDEQRKILDAVTRAKMPLPHWEDADGPTEDMFIHN-QDFKGLSWDSFLPDRYARWLFDEAD---MSSTYEYQKRYLQV-GSWSLKMPSHVHIEALLKVF----PDARLIWAHRDPYKATGSLCNLWRLPQSLVMNTE----------------------------LLDQTEMGRLAMWQMRYHVDRPLRARER--IGDERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLPQDRFALNAYRLD---------EYGL-----TVEALQPIFAEYLDTFDIELEGR----------------- |
5 | 3ap1A | 0.18 | 0.10 | 3.12 | 1.29 | MapAlign | | -------------------------------------------------------------------------------------------------------------------------------------------------------LVMVVEYRYGKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEETR-------------IIPRVLAMRQAWSKSGRE-----------------------------------KLRLDE---AGVTDEVLDA---AMQAFILEVIAKARVLCNKDPFT--LKSSVYLSRL-FPNSKFLLMVRDGRASVHSMITRKVTI-----------------------------------AGFDLSSYRDCLTKWNKAIEVMYAQCMEV---GKEKCLPVYYEQLVLHPRRSLKLILDFLGIAWSDAVLHHEDLIVSLSKIERSTDQVIKPVNLEALSKWTGHIPGDVVRDMAQIAP-MLAQLGYDPY----ANPPNYGNPDPFVIN |
6 | 4gbmA | 0.19 | 0.10 | 3.22 | 2.79 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------SRLPGIIFILSSPRSGSTLLRVMLAGHSSLFSPPELHL-L-----PFNTM----KE--RQ-EQLNLSYLGEGL-QK------------TFMEVKN-------LDATASQA---LIKDLESQNL--SIQQVYGMLQIAPRLLVDKSPTYAMEPTILERGEALFANSKYIYLVRHPYSVIESFVRMRMQKLV-------G-------------LG-----------EENPYR---VAEQVWAKSNQNILNFLS--QLEPERQHQIRYEDLVKKPQQVLSQLCDFLNVPFEPELLQPYQGDRMTGAASSDNFLKHNTIDESLADKWKTIQLPY---PLKSETQRIASQLSYELP------------------- |
7 | 4gbmA | 0.20 | 0.10 | 3.31 | 1.70 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------SRLPGIIFILSSPRSGSTLLRVMLAGHSSLFSPPELHLTMKERQEQLNLSYLGEGLQKTFMEVKNLDATASQ----------------------------------------ALIKDLESQNLSIQQVYGMLQENIAPRLLVDKSPTYAMEPTILERGEALFANSKYIYLVRHPYSVIESFVRMRMQKLV---------------------------------GLGEENPYRVAEQVWAKSNQNILNFLSQLEPE---RQHQIRYEDLVKKPQQVLSQLCDFLNVPFEPELLQPYQGDRMTGGVSDPNFLKHNTIDESLADKWKTIQLPYP---LKSETQRIASQLSYEL-------------------- |
8 | 3ap1A | 0.19 | 0.10 | 3.22 | 1.38 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------PLIFVGGVPRSGTTLMRAMLDAHPEVRCGEET--------------RIIPRVLAMRQAWSKSGREKLRLDE------------------------------------AGVTDEVLDAAMQAFILEVIAKHGEPARVLCNKDPFTLKSVYLSRLFP----NSKFLLMVRDGRASVHSMITRK-----------------------VTIAGFDLS------------SYRDCLTKWNKAIEVMYAQCMEV---GKEKCLPVYYEQLVLHPRRSLKLILDFLGIAWSDAVLHHEDLIVSLSKIERSTDQVIKPVNLEALSKWTGHIPGDVVRDMAQIA-PMLAQLGYDPYANPPNYGNPDPFVINNTQR |
9 | 2z6vA | 0.10 | 0.08 | 2.76 | 1.18 | MapAlign | | -SDFDNITTADDVFKLAAQRTGLSEIDSDSWREGLALIVDEVNTSPVFTPFGRQRVLDDATNALGRRLQVHAYI------------------------------------------------------------------------------QDHPEVLDAPVERPLIVLGMPRTGTTVISYLLDQDPARRSLLHWQCVHPIPPASTETLRTDPRCLALLDEQR-----KILDAVTRAKMPLPHWEDADGPTEDMFIHNQDFKGLSWDSLPTDRYARWLFDADMSSTYEYQKRYLQVLGSWSLKMPSHSV--HIEALLK-VFPDARLIWAHRDPYKATGSLCNL-----WRLPQSLVM---NTELLDQTEMG----------------RLAMWQMRYHVDRPLRARER------IGDERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWL------------AHHPQD-RFALNAYRLDYGLVEALQPIFAEYLDTFDI-----ELEGR------------ |
10 | 3ap1A | 0.18 | 0.10 | 3.18 | 2.79 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------LVMV---------------------------VEYRYGKAMPLIFVGGVPRSGTTLMRAMLDAHPEVRCGEETRI--IPRVLA--------MR----QAWSKSGREKL----R------------LDEAGVTD------------EV----LDA-AM-------QAFILEVIAPARVLCNKDPFT---LKSSVYLSRLFPNSKFLLMVRDGRASVHSMITRKVTIA--------GFD-------------------------LSSYR------DCLTKWNKAIEVMYAQMEVGKEKCLPVYYEQLVLHPRRSLKLILDFLGIAWSDAVLHHEDLIGKPGGVSLSTDQVIKPVNLEALSKWTGHIPGDVVRDMAQ-IAPMLAQLGYDPYANPPNYGNPDPFVINNTQR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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