Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCSSSSSSCCSSSSSSSSCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCSSCCHHHCCCCCCCCSSCCCCCCCCSSSCCCCCCCCCCCCCSSCCCCSSCCCCCSSSSSSSSCCCCCCCCSSSSSSSSCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCSSSSSSCCCCCCCCCSSSCCCCCCCCCCCCCC MDSGGGSLGLHTPDSRMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEEDLEEDDGDHILTSELITETVRVPEQVFVADLVTGPNGHLEHVVQDCVSGVDSPTMVSEEVLVTNSDTETVIQAAGGVPGSTVTIKTEDDDDDDVKSTSEDYLMISLDDVGEKLEHMGNTPLKIGSDGSQEDAKEDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESEYTSGHSVAGVLDQSRMQREKMVYM |
1 | 3ol2B | 0.06 | 0.06 | 2.57 | 0.74 | CEthreader | | LPPTAFTPNGTYLQHLARDPTSGTLYLGATNFLFQLSPGLQLEATVSTGPVLDSRDCLPPVMPDECPQAQPTNNPNQLLLVSPGALVVCGHQGVCEQRRLGQLEQLLLRPERPGDTQYVAANDPAVSTVGLVAQGLAGEPLLFVGRGYTSGGGIPPITTRALWPPDPQAAFSYEETAKLAVGRLSEYSRDLQAQSRAFREGGRYGLIQAAAVATSAHGEVLFAAFSSAAPPPSAAAGASGASALCAFPLDEVDRLANRTRDACYTREGRAEDGTEVAYIEYDVNSDCAQLPVD |
2 | 6eu4A | 0.06 | 0.05 | 2.43 | 0.60 | EigenThreader | | TVADLAYVKGYYQPTNKPYVGGGHRIYVASRAAENDGFLCINGWVLQTVSPEHAGAKLFDSAIPIQKVLISGCKGLYHTSVPVYYGFIKTT---NNTLSLGNRTINGKINFDVDAIVAIPSALPTKGIGLYAWERVTTQTFIGCWATD--AGLQGCTISCGADFVGAFNGQAIYNKYKPATSSFGFAYNSSDPTQGANCSALAYVEFEVSPETTFAVPLEE--IGISSLT------AFTKLGVYYTDAYVKSITNLRGSLGNAVLVQSSTANATVANGFPSSGVPYLVQQWSA |
3 | 6zywD | 0.10 | 0.08 | 2.92 | 0.35 | FFAS-3D | | --------------------------------DQR---KKNVTSIPDLFAVSLGSYDFTKQRMGLICLYSLKNTT-------------HPEYAFNCEAGVMCLDFHPKSAALLAVGLYDGTVSSDGRVMNWILMKNKNEEESTLIGLACGLCFDFNKFEPHIFLVGTEEGKIHKCSRAYSGQYQETYNGHLLAVYKNNFHPRTFISASADWTVRIWKYTSQIICFDLSMMVVDAVWAPYSSTVFKVQVYDLNVDKLNKLPKLTNLSFN--YKDPILLVGDSHGGV-------- |
4 | 5fvmC | 0.09 | 0.08 | 3.11 | 0.77 | SPARKS-K | | SAGYDHTIRFWEALTGVC----SRTIQHADSQVNRLDKKYLAAAGHLHVRLYDIRSNNPNPVKGNVTSIAFQQENRWMVSSSEDGTIKVWDVRSPSVQR------NYKHNAPVNEVAIHPNQGQDGNIRIWDLENQCTNQLTPEDNTPLQSLSVASDGSMLVAGNNKGNCYVWRMPHHTDASTLEPVTKFKSHTKYSADVKNLATCSADHTARVWNIEDNYQLETTLDGHQRWCAFSADSAYLVYVRLWDLSTSEI---------VRQYGGHHKGAVCVALN----------- |
5 | 2af5A | 0.13 | 0.08 | 2.83 | 0.67 | CNFpred | | --------------------------------------YDLIATVDKLELKGTSDKNNGSGVLEKVKLTISDDLGQTTLEVFKEKTLVSKKVTSKDKSSTEEKFNE---------ELSEKKITRADKSSTEEKFNEKGELSEKKITRSSTEEKFNGEVSEKIITRA--DGTRLEYT--------GIKS----------DGSGKAKEVLK--GYVLEGTLKTTLVVKEG------------TVTLSKNISKS-------GEVSVELNDTD------------------------ |
6 | 6m76A | 0.08 | 0.06 | 2.54 | 0.67 | DEthreader | | VITYQFIFMEETATLKQ--NYFGGGTQNGR---NWV---VASPNFYWYGVVR---------TTTHTDFDAF---YFFNDSSAIL-----MEYGFYE-AHLNA--AVKFEGDRYKKMLFLAEVGVWGDMWKTFT------F--DQEATDL---NRAYLKKSMMMNIMVMWLLVAPI-GNSIRDIVDEKYQG-GRVL--FVKDSIIPMYEDDGSYEAGQ---A-TTKINSQ-GPKSNE------VTIEPTKGSYK------FVDERSTTLVTATLKQAANEEFLAYVKL-Q-VTD |
7 | 5gqtA | 0.09 | 0.09 | 3.28 | 1.00 | MapAlign | | KLEAKGGEMGDVWDDGVYENVRKVYVGQAQYGIAFTELGVEEFEIIVYVEGYREITFLSIKTFKGKTSHRPGVKFVLHGGKIQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSVGSTLYVFGGRDASRQYNGFYSSFHSMAADEENVYVFGGVSATARLNTLDSYNIVDKKWFHCSSLTARGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQERSVFSAAIGKHIVTIDGKKGLVMHG--------GKAPTNDRFDDLFFYGI |
8 | 1kanA | 0.13 | 0.11 | 3.77 | 0.51 | MUSTER | | M----------NGPIIMTREERMKIVHEIKERILDKYGDDV-----KAIGVSLGRQTDGCVMSTEEAEFSHEWTTGEWKVEVN---FYSEEILLDY-------ASQVESDWPLTHGQ----------FFSILPIYDSGGYLEKVYQ--TAKSVEAQKFHDAI--CALIVEELFEYAGKW-RNIRVQGPTTFLPSLTVQVAMAGAMLIGLHHRICYTTSAS----VLTEAVKQSDLPSGY-DHLCQF-VMSGQLSDSEKLESLENFWNGIQEERHGYIVDVSK-RIPF------ |
9 | 2pffB | 0.18 | 0.16 | 5.35 | 0.80 | HHsearch | | MDAYSTRLTLSHGSLEHVLLVPTASFIASQ---LQEQFNKILPEPTEGFAAD----DEPTTPANDIHALAQENDTTLVIKNYIT-ARIMAKRPFDKDDYFEELRDLYQTYHVLVGDLIKFSALDAEKVFTQGLNIL--EWLENPSRSYLKGATGQGLVTLFFIGVRCYE-AYPNTS--LPPSILEDSLENSISNLTQEQVQDYVNKTHLPAGKQVESNGAKNLVVSGPPQLTLRKAKGLDQSRIPFSERKLKFSNRF-L-----PVASPFHSHLLVLRVLSG--SISERIVDC |
10 | 3hrpA | 0.06 | 0.06 | 2.75 | 0.72 | CEthreader | | REKVIVKGSNFGTDKSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKVIVDGKEVTTDGTFKYEQAQNVSTISGSASKDGNDDGDLASAKFKYWAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYKASGWAPTRIGQLGSTFSGKIVKTQEVTLIKQLELSGSYYFVDSNFYSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNFYIVDGFKGYCLDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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