Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCSSSSCCCCCCSSSCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHSSSSCCCCCSSSSSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCSSCCCHHHHHHHCCC VDTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLESPVEDSLWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNYGMQEKNPIDHVSFYCKTAPNRAIRITKNQVSQLLPE |
1 | 6pwyA | 0.31 | 0.31 | 9.42 | 1.50 | DEthreader | | MEPKHIINDNVYGTVKVPRPIDKLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAYALVDKLRHSQPSLNITESDLICTSVAALLRNVGHGPFSHLFDGEFAKRNGS-R-FKHEDMSILIIKKIMNKPEIKSEFA-CILGYAKSVTLITELISGKPDFQMTVKEWAIIGCGPEKSFLFDVVSNSYNGHDVDKMDYLLRDSKASGVGISETLERLFNHVRVVIDSGLKRIAYSIKCIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTEDVDAFLKTTDYVEQEILNSITDKMIEAQTALLKIQRRIGMHSVGGLHPERQIFYDGKVVGFYPSEVINNCPRATK |
2 | 6brgA | 0.77 | 0.74 | 20.97 | 2.77 | SPARKS-K | | IDLMKVFNDPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRALAEKQPELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPRARPEKKWKHEQGSIEMFEHLVNSNELKLVMKNYGLVPEEDITFIKEQIMGPL--------WPYKGRPATKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARICEVEYKKHICSREKEVGNLYDMFHTRNCLHRRAYQHKISNLIDIMITDAFLKADPYVEITGTAGKKFRISTAIDDMEAFTKLTDNIFLEVLHSTDPQLSEAQSILRNIECRNLYK----YLGETQPKREKIRKEEYELKAEDFIVDVIN |
3 | 6pwyA | 0.34 | 0.34 | 10.06 | 2.08 | MapAlign | | --PKHIINDNVYGTVKVPRPIDKLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAYALVDKLRHSQPSLNITESDLICTSVAALLRNVGHGPFSHLFDGEFAKRN--GSRFKHEDMSILIIKKIMNKPEIKSEFACILGEYAKSVTLITELISGPFDFQTVKNEWAIIGCGPEKSFLFDVVSNSYNGHDVDKMDYLLRDSKASGVGITFTLERLFNHVRVVIDSGLKRIAYSIKCIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTEDVDAFLKTTDYVEQEILNSTDPKMIEAQTALLKIQRREILDDKTHPIERQIFYDGPSQVVGFYPSEDYVINNC-- |
4 | 6pwyA | 0.34 | 0.34 | 10.07 | 1.57 | CEthreader | | MEPKHIINDNVYGTVKVPRPIDKLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAYALVDKLRHSQPSLNITESDLICTSVAALLRNVGHGPFSHLFDGEFAKRN--GSRFKHEDMSILIIKKIMNKPEIKSEFACILGEYAKSVTLITELISGKPFDETVKNEWAIIGCGPEKSFLFDVVSNSYNGHDVDKMDYLLRDSKASGVGITFSLERLFNHVRVVIDPNSKRIAYSIKCIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTEDVDAFLKTTDYVEQEILNSQDPKMIEAQTALLKIQRREILDDKTHPIERQIFYDGKPQVVGFYPSEDYVINNCPR |
5 | 3u1nA | 0.82 | 0.78 | 22.02 | 1.84 | MUSTER | | ------PGDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSH-FDGRFIPLARPEVKWTHEQGSVFEHLINSNG--IKP-VEQYGLIPEEDICFIKEQIVGPLEL------WPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICAR-DKEVGNLYDFHTRNSLHRRAYQHKVGNIIDTITDAFLKA-DDYIEITGAGGKKYRISTAIDD-EAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLQPTGQIKIKREDY-AKPKVLLDVKLKAEDFIVDVIN |
6 | 6pwyA | 0.33 | 0.33 | 9.85 | 4.95 | HHsearch | | MEPKHIINDNVYGTVKVPRPIDKLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAYALVDKLRHSQPSLNITESDLICTSVAALLRNVGHGPFSHLFDGEFAKRN--GSRFKHEDMSILIIKKIMNKPEIKSEFAC-ILGEAKSVTLITELISGKPDFETVKNEWAIIGCGPEKSFLFDVVSNSYNGHDVDKMDYLLRDSKASGVGITFSEERLFNHVRVVIDSGLKRIAYSIKCIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTEDVDAFLKTTDY-VEQEILNQDPKMIEAQTALLKIQRRESGRGLTHPIERQIFYDGKPSQVGFYPSEDYVINNCPR |
7 | 6pwyA | 0.34 | 0.34 | 10.07 | 3.11 | FFAS-3D | | MEPKHIINDNVYGTVKVPRPIDKLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAYALVDKLRHSQPSLNITESDLICTSVAALLRNVGHGPFSHLFDGEFAKRNGS--RFKHEDMSILIIKKIMNKPEIKSEFACILGETDEEYAKSVTLITELISGKPFDFEWAIIGCGPEKSFLFDVVSNSYNGHDVDKMDYLLRDSKASGVGITFTLERLFNHVRVVIDPGLKRIAYSIKCIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTEDVDAFLKTTDYVEQEILNSTDPKMIEAQTALLKIQRREIGDDKTHPIERQIFYDGKPSQVGFYPSEDYVINNCPR |
8 | 6pwyA | 0.33 | 0.32 | 9.70 | 2.47 | EigenThreader | | MEPKHIINNVY---GKVPRPIDKLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAYALVDKLRHSQPSLNITESDLICTSVAALLRNVGHGPFSHLFDGEFAKRNG--SRFKHEDMSILIIKKIMNKPEIKSEFACILGETAKSVTLITELISGKPFDGFKDLPWAIIGCGPEKSFLFDVVSNSYNGHDVDKMDYLLRDSKASGVGITFSESTLERLFNRVVIDGLKRIAYSIKCIGDLKAIGDSRQELHSKVYQHKAVRFMETLMVDALINAGDFLKYKGSNGELYSLKNVTEDVDAFLKTTDYVEQEILNSTDPKMIEAQTALLKIQRRRGLDDKTHPIERQIYDGKPSQVVGFYPSENNCPRMATK |
9 | 5ao2A | 0.94 | 0.89 | 24.95 | 2.86 | CNFpred | | ---MKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNAFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPL-------LWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRN-------LFKYVGETQPT---GQIKIKREDYESLPKE |
10 | 6brgA | 0.81 | 0.74 | 20.77 | 1.33 | DEthreader | | QDLMKVFNDPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRALAEKQPELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPRARPEKKWKHEQGSIEMFEHLVNSNELKLVMKNYGLVPEEDITFIKEQIMGP------L-W-PYKGRPATKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARICEVRKVKHICSREKEVGNLYDMFHTRNCLHRRAYQHKISNLIDIMITDAFLKADPYVEITGTAGKKFRISTAIDDMEAFTKLTDNIFLEVLHSTDPQLSEAQSILRNIECRNLYEINVD----RVHF----Y----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|