Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCCC MVMAEGTAVLRRNRPGTKAQDFYNWPDESFDEMDSTLAVQQYIQQNIRADCSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA |
1 | 7k36H | 0.89 | 0.68 | 19.00 | 1.17 | DEthreader | | -------------------KAQDFYNW-----T---LAVQQYIQQNIRADCSNIDKILEPP---DEGVWKYEHLRQFCLELNGLAVKLQSECH-PDTC--------IFLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKD-NL-IV--PI----------- |
2 | 7k36H | 0.97 | 0.76 | 21.31 | 2.77 | SPARKS-K | | -----------RNRPGTKAQDFYNW----------TLAVQQYIQQNIRADCSNIDKILEPPD---EGVWKYEHLRQFCLELNGLAVKLQSECHPDTCIFLCAA---------HKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPI--------------- |
3 | 7k36H | 0.99 | 0.78 | 21.91 | 1.34 | MapAlign | | -----------RNRPGTKAQDFYNW----------TLAVQQYIQQNIRADCSNIDKILEPP---DEGVWKYEHLRQFCLELNGLAVKLQSECHPDTC--I-------FLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPI--------------- |
4 | 7k36H | 0.98 | 0.77 | 21.55 | 1.31 | CEthreader | | -----------RNRPGTKAQDFYNWT----------LAVQQYIQQNIRADCSNIDKILEPP---DEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCIFL---------CAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPI--------------- |
5 | 1r3bA | 0.21 | 0.18 | 5.66 | 2.01 | MUSTER | | -----------------------MGSSHHHHHHSS--GLVPRGSATLGSG--NLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTESTCSVMSAGPRYEYHWADGKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDAVMQLQEENTSFKHFIFFVQEFNLIDRREL-APLQELIEKLGSKDR--- |
6 | 7k36H | 0.97 | 0.76 | 21.31 | 5.73 | HHsearch | | -----------RNRPGTKAQDFYNW----------TLAVQQYIQQNIRADCSNIDKILEPP---DEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCIFLCAAH---------KTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPI--------------- |
7 | 7k36H | 0.95 | 0.75 | 20.95 | 2.72 | FFAS-3D | | -----------RNRPGTKAQDFYNWT----------LAVQQYIQQNIRADCSNIDKI---LEPPDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCIFLCAA---------HKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPI--------------- |
8 | 1r3bA | 0.18 | 0.16 | 5.06 | 1.40 | EigenThreader | | ----------MGSSHHHHH----HSSGLVPRGSATL-------------GSGNLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTESTCSVMSAGPRYEYHWTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDAVMQLQEENTSFKHFIFFVQEFNLIDR-----RELAPLQELIEKLGSKD |
9 | 5b5vA | 0.21 | 0.17 | 5.35 | 1.74 | CNFpred | | ----------------------------------HQYELLKHAEATLG--SGNLRMAVMLPEGEDLNEWVAVNTVDFFNQINMLYGTITDFCTEESCPVMSAGPKYEYHWADG--PIKCSAPKYIDYLMTWVQDQLDDETLFPSKVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDPVIQLQEEAHLFKHFIFFVQEFNLIDRREL-APLQELIEKL-------- |
10 | 2hjnA | 0.24 | 0.18 | 5.55 | 1.17 | DEthreader | | -NVTD-------T-PSH------------------FL-------------------AVKLPRGEDENEWLAVHCVDFYNQIN-LYGSITEFCSPQTCPR-IATNEYEYLWAFQKQPVSVSAPKYVECL-RWCQDQFDDESLFPSTGTFPEGFIQVIQPILRRLFRVYAHIYCHHFNEILLLQTLNTSFRHFCLFAQEFELL-RPADFGPLLELV-ELR----D-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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