Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCSCCCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSCCHHHHHHCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSHHHHCC MAAAFRKAAKSRQREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQQNKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQKEKVKGVTNQTGLKRIAKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSPAIYKFQSRRKR |
1 | 5wlcSY | 0.33 | 0.30 | 9.15 | 2.44 | SPARKS-K | | ---KLVH--DVQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNPDEYYHAMHSRKTDKGLLISDEEDESLSMDQVKLLKTQDSNYVRTLRQIELKKLEKGAKQL-----MFKSSGNHTIFVDSREKMNEFTPEKFFNTTSEMVNRSENRLT-----KDQLANASSIMPKESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKGSKKKIVD--SSGKISFKWKKQRKR |
2 | 5wlcSY | 0.32 | 0.30 | 9.04 | 2.27 | MUSTER | | ---KLVHDVQ--KKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNPDEYYHAMHSRKTDKGLLISSRHGESLSMDQVKLLKTQDSNYVRTLRQIELKKLEKGAKQLMF-----KSSGNHTIFVDSREKMNEFTPEKFFNTTSEMVNRSENRLTKDQLANASSIMPK-----ESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKGSKKKIVD--SSGKISFKWKKQRKR |
3 | 5wlcSY | 0.32 | 0.29 | 8.82 | 9.21 | HHsearch | | ---KLVHD--VQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNPDEYYHAMHSRKTDKGLLISSRHGESLSMDQVKLLKTQDSNYVRTLRQIELKKLEKGAKQLMF-----KSSGNHTIFVDSREKMN-EFTPEKFFNTSEMVNRSENRLTKDQLANASSIM-----PKESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKSKKKIVDSS--G-KISFKWKKQRKR |
4 | 5wlcSY | 0.32 | 0.30 | 8.93 | 2.72 | FFAS-3D | | ----LVHDV--QKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNPDEYYHAMHSRKTDAKGLLIDEEDESLSMDQVKLLKTQDSNYVRTLRQIELKKLEKGAKQLMFKS-----SGNHTIFVDSREKMNEFTPEKFFNTTSEMVNRSENRLT-----KDQLANASSIMPKESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKGSKKKIVDSS--GKISFKWKKQRKR |
5 | 6e59A | 0.05 | 0.04 | 1.61 | 0.83 | DEthreader | | --------------------------------------------------------------------------VLWAAATVVSVVNAFAAASIYTIYFLPLLVIGYAYTVVGITLWASEG--I-DCSFWNYLLMFIGRFDRVDVLLKAIEILMRFISVDFVEACLAIPIALAILKALLSRSDLSKFRENCKKRAMSFSEQVSAKRKVVKMMIVVVCTFAIWLPFHIFFYLAWLSMYNPIIY----------- |
6 | 5oqlH | 0.34 | 0.24 | 7.11 | 1.91 | SPARKS-K | | -MSSLRH--AIQRRAHKERAQPLERQRLGILEKKKDYRLRARDYKKKQAVLKSLRQKAAERNEDEFYFGMMSRKGFTGTVDGDRGNKALSVETVRLLKTQDLGYVRTMRNIAAKELKELEERYVLAGV------------------------------------------------------------------LEKLARKVKAARKKLKALADAEYELELQQAKMAKTATSGGFTKSGR-----RIKVERKR |
7 | 6lumA | 0.07 | 0.07 | 2.79 | 0.74 | MapAlign | | -LYPTRSHTGAAQGGMCAALANVEEDNWEWHTFDTVKDQDAVEIMCKEAIDAVLDLEKMPFNRTPEGRIDQRRHTRGKAPVRACYAADTGHMILQTLYQNCVKRMHTLT--GDGLGIVFRKLPLEDMEFHQFHPTGPTIVDLAPRDIVARSMVLEVYPTCHYVMGGIPTTVNGQVLYAAGECACVSVINVFGRRAGIAAAEYAQEAIELGFLLELAEVTVVGALNRKERHTMAYKQGTDLLSDILDYKPV--- |
8 | 5wlcSY | 0.31 | 0.29 | 8.83 | 0.74 | CEthreader | | ---KLVHD--VQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNPDEYYHAMHSRKTDAKGLLISSRHGDESMDQVKLLKTQDSNYVRTLRQIELKKLEKGAKQLMF-----KSSGNHTIFVDSREKMNEFTPEKFFNTTSEMVNRSENRLTKDQLANASSIMPK-----ESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKGSKKKIVD--SSGKISFKWKKQRKR |
9 | 5oqlH | 0.34 | 0.24 | 7.22 | 1.56 | MUSTER | | -MSSLRHAIQ--RRAHKERAQPLERQRLGILEKKKDYRLRARDYKKKQAVLKSLRQKAAERNEDEFYFGMMSRKGFTGTVDGDRGNKALSVETVRLLKTQDLGYVRTMRNIAAKELKELEERYVLAG------------------------------------------------------------------VLEKLARKVKAARKKLKALADAEYELELQQAKMAKTATSGGFTKSGR----RIKVRERKR |
10 | 5oqlH | 0.35 | 0.25 | 7.43 | 6.91 | HHsearch | | -MSSLRHA--IQRRAHKERAQPLERQRLGILEKKKDYRLRARDYKKKQAVLKSLRQKAAERNEDEFYFGMMSRKLTRGKGFTGRGNKALSVETVRLLKTQDLGYVRTMRNIAAKELKELEERYVLAGVL------------------------------------------------------------------EKLARKVKAARKKLKALADAEYELELQQAKMAKTATSG--GFTK--SGRRIKVRERKR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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