>Q9Y2T4 (127 residues) VHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRE SSKPRAVLKPRRVCVGGKRRRDDISVDSLDFTKKILHTAWHPAENIIAIAATNNLYIFQD KVNSDMH |
Sequence |
20 40 60 80 100 120 | | | | | | VHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCVGGKRRRDDISVDSLDFTKKILHTAWHPAENIIAIAATNNLYIFQDKVNSDMH |
Prediction | CCHHHHHHHHHHHHHCCCCSSSSSSSCCCCCSSSSCCCCCCSSSSCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCSSSSSSCCCSSSSSCCCCCCCC |
Confidence | 9447889999876313211214544469997476247787158852799885100013465676667877422367877766789876674312331245888773223333836997455688999 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | VHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCVGGKRRRDDISVDSLDFTKKILHTAWHPAENIIAIAATNNLYIFQDKVNSDMH |
Prediction | 7364137401512434100230402234744312333443202113463655243444464455744454453345455456635263351444114322334432000002210101344356758 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHHCCCCSSSSSSSCCCCCSSSSCCCCCCSSSSCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCSSSSSSCCCSSSSSCCCCCCCC VHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCVGGKRRRDDISVDSLDFTKKILHTAWHPAENIIAIAATNNLYIFQDKVNSDMH | |||||||||||||||||||
1 | 5yzvA2 | 0.14 | 0.13 | 4.28 | 1.55 | SPARKS-K | ---------------GHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGERDVLQAPAENVVSLAFSPDGSMLVHGSDSSGEALHTFEGHTDWVRAVAFSPDGALLASGSDDTIRLWDVAAQEEHT | |||||||||||||
2 | 3dw8B3 | 0.85 | 0.82 | 23.07 | 1.19 | MUSTER | VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDKV----- | |||||||||||||
3 | 3dw8B3 | 0.85 | 0.81 | 22.85 | 1.41 | FFAS-3D | -HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDKV----- | |||||||||||||
4 | 3sfzA | 0.15 | 0.13 | 4.24 | 1.76 | CNFpred | --------------------VLCCAFSSDDSYIATCSADKKVKIWDSATGLVHTYDEHSEQVNCCHFTNKHLLLATGSND-KECRNTMFGHTNSVNHCRFSPDDELLASCSAGTLRLWDVRSANERK | |||||||||||||
5 | 4n1iA | 0.11 | 0.09 | 3.11 | 0.83 | DEthreader | HWADMATA--Q---VA--DDFEAVQVYTVQYLMIVEAQGRYFRSFTANEWKVQGSES--------------APFAGK-A-------NSGAWTNDVSHGDLIRSRLQLLYQGRYRPGLLTLGLEQKIS | |||||||||||||
6 | 1r5mA3 | 0.09 | 0.08 | 2.96 | 1.50 | SPARKS-K | ---------------------VSVKWNKDGTHIISMDVENVTILWNVISGVMQHFELKGSLGVDVEWVDDDKFVIPGQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDTLRIWHGGNGNSQN | |||||||||||||
7 | 6f3tA2 | 0.10 | 0.09 | 3.53 | 0.45 | MapAlign | --DKLDKIMNMKETYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLGYKGHNYPVWDTQFSPGYYFVSGGHDRVARLWATIFGHLADVNCTRFHPNSNYVATGSADTVRLWDVLNGNCV- | |||||||||||||
8 | 5yzvA1 | 0.13 | 0.13 | 4.35 | 0.28 | CEthreader | ------HELNEPRILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVEGHTHYVLDIAFSPDGSMVASGSRDTARLWNVATGTEHA | |||||||||||||
9 | 3dw8B | 0.85 | 0.82 | 23.07 | 1.16 | MUSTER | VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDKV----- | |||||||||||||
10 | 3dm0A | 0.09 | 0.09 | 3.29 | 0.65 | HHsearch | AYGVAQ---RRLTGHS--HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSRRFVGHTKDVLSV-AFSLDRQIVSASRDRLGCKYTIEGHRDWVSCVRFSPNTLTIVSASWDTVKVWNLSNCKLRS | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |