Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCSSSSSSSCCCCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCHHHHHHHHHHHHCCCCCCSSSSHHHHHHHHHCCHHHHHHHHHHHCCCCCCSSSSCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCHHHHHHHHHHCCCSSSHHHHHHHCCCCHHHHHHHCCCCHHHHHCCCC MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVCPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIESG |
1 | 6fszJJ | 0.39 | 0.35 | 10.30 | 1.33 | DEthreader | | RSVTQKV----------KIVREHYLRSDIPCLSRSCTKCPIVVPLPKFILSDSP--LELSAGKHYVVLDTNVVLQAIDLLENNCFFDVIVPQIVLDEVRNKSYPVYTRLRTLCRSDDKRFIVFHNEFSEHTFVERLPNETINDRNNRAIRKTCQWYSEHLK-PY---DINVVLVTNDRLNREAAEVSNIITKSLVQYIELLPNADDIRDSIPQ------NIRTR |
2 | 6d6qK1 | 0.99 | 0.91 | 25.51 | 2.74 | SPARKS-K | | MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPQ------PHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNNRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLA------------ |
3 | 6d6qK | 0.94 | 0.91 | 25.56 | 1.55 | MapAlign | | MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQP------QDPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNNRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLATVWIHKEIILQ- |
4 | 6d6qK1 | 0.99 | 0.91 | 25.39 | 1.30 | CEthreader | | MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQP------QDPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNNRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLA------------ |
5 | 6d6qK1 | 1.00 | 0.92 | 25.63 | 2.44 | MUSTER | | MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQD------PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNNRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLA------------ |
6 | 6fszJJ | 0.39 | 0.38 | 11.34 | 5.00 | HHsearch | | SVTQKVFVR-SRNGGATKIVREHYLRSDIPCLSRSCTKCPQIVVPDAQNESDSPLELSAPIGKHYVVLDTNVVLQAIDLLENPCFFDVIVPQIVLDEVRNKSYPVYTRLRTLCRDSDKRFIVFHNEFSEHTFVERLPNETINDRNNRAIRKTCQWYSEHLKPY----DINVVLVTNDRLNREAATKENIITKSLVQYIELLPNADDIRDSIPQTFSDMGGLKNG |
7 | 6d6qK1 | 0.99 | 0.91 | 25.39 | 2.85 | FFAS-3D | | MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQP------QDPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNNRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLA------------ |
8 | 6d6qK1 | 0.92 | 0.84 | 23.70 | 1.57 | EigenThreader | | MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCA--ACGGAHEGPALEPQPQDP----QPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNNRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLA------------ |
9 | 6d6qK | 1.00 | 0.92 | 25.63 | 2.05 | CNFpred | | MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQD------PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNNRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLA------------ |
10 | 6fszJJ | 0.39 | 0.35 | 10.30 | 1.33 | DEthreader | | RSVTQKV----------KIVREHYLRSDIPCLSRSCTKCPIVVPLPKFILSDSP--LELSAGKHYVVLDTNVVLQAIDLLENNCFFDVIVPQIVLDEVRNKSYPVYTRLRTLCRSDDKRFIVFHNEFSEHTFVERLPNETINDRNNRAIRKTCQWYSEHLK-PY---DINVVLVTNDRLNREAAEVSNIITKSLVQYIELLPNADDIRDSIPQ------NIRTR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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