Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSCCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCSSSSSSSSSSCCCCSSSSSSSSSCCCCCCCCCCCCCSSSSSSSSCCCCCCCSSSCCSSCCCCCCSCCCSSSSSCCHHHCCCCSSSSSSSSCCCCCCCCSSSSSSSCCCCCCCHHHHHHHHHHCCCCSSSSSSSCCCCCCCCCC MTDTVFSNSSNRWMYPSDRPLQSNDKEQLQAGWSVHPGGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSACVVCEDCKKNVCTKCGVETNNRLHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGNYGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAPGSVQSPRVIPMKRAGTTGSARGMALYEEEQVERVGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD |
1 | 1djiB | 0.09 | 0.07 | 2.80 | 0.80 | EigenThreader | | --------------NKMNFKELKDFLKELNIQVDDGHSQTDSLEKMLTQRAEIDRAFEEAAGRLVTFLQHQALALSLIERYEDGFLMYLLSADGNA-----FSLAHRRVYQDMDQPLSHYSHNTYLLEDQLTGGCRCLELD---------CWDGP----NQEHGYTFTSKFKASPYPLDQPLDGVTTSLPSPEQLKGKKLGGLDKLKLVPELSDMIIYFGGFSSPGTSGQAFYLSRIYPAGWRTDSS-----NYSPVEMWNGGCQIVALNFQTPGFQDNGGCGYVLKPAFLRDPNTTFNSRALT----------QGPWW------------RPERLRVRIISGQQLPKVNKNIVDPKVIVEIHGV-----GRDTAVITNNGFNPRWDMEFEFEVTVP--DLALVRFMVEDYDSSSKNDFIGQSTIPWNSL-------------KQGYRHVHLLSKNGD----Q |
2 | 2r83A | 0.22 | 0.13 | 4.16 | 0.54 | CEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAM |
3 | 3n5aA | 0.38 | 0.11 | 3.39 | 1.33 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLKA------- |
4 | 2cm6A | 0.94 | 0.30 | 8.49 | 2.42 | SPARKS-K | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MALYEEEQVERIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKP---KKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNE------ |
5 | 4ldcA | 0.73 | 0.23 | 6.56 | 1.91 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEERGRILISLKYSSQKQGLLVGIVRCAHLAAMDANGYSDPYVKTYLKPDVDKKSKHKTAVKKKTLNPEFNEEFCYEIKHGDLAKKTLEVTVWDYDIGKSNDFIGGVVLGINAKGERLKHWFDCLKNKDKRIERWHTLTNEIPGAVL |
6 | 2uvcG | 0.08 | 0.05 | 1.95 | 0.67 | DEthreader | | FSFVVVILFERFMRGN------------------DRDDNAVQFAVWEHTKMSRLLVPPVMVCMFGSRMMTIVIHKLATGVLFWKELDK-KKRRDYIIKKLNDWGRNSAGEPVDLED-----VVHRELMLTFIRDVFLLCVPFVWFKKDSLWQSECILQ----------------------------------------ELRAPATSAAVSLETNNIGRVRSY------IAGRKEQPVTAYVFTSQEMGMDLYATK----SIIDIVKLMASFDMR--VSTFAGHSNTEQLQYVVENIAEVTGWLLEIVVAALLPLRIDVPFHS---------------------TFLR-------SGVKPFRS-L---NK------------------------------PS--------------------PNVT---PFE-ISKEYFEEV--H----RLTG----------- |
7 | 2r83A | 0.28 | 0.14 | 4.16 | 1.00 | MapAlign | | ----------------------------------------------------------------------------------------GKLQYSLDYDFQNNQLLVGIPYVKVFLLPDKKKFETMAVYDFDRFSKHDIIGEFKVPMN----------------------------------------------------------------------------------------------------------------------------------------------------TVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEVDAM |
8 | 2cm6A | 0.93 | 0.30 | 8.43 | 1.21 | MUSTER | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MALYEEEQVERIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLK---PKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNE------ |
9 | 1zbdB | 0.94 | 0.24 | 6.73 | 2.06 | HHsearch | | -----------------------------------------------EELTDEEKEIINRVIARAEK--ETEQERIGRLVDRLET-RKNVAGDGVNRCILCGEQLG-LGSASVVCEDCKKNVCTKCGVETSNRPHPVWLCKICLEQREVWKRSGAWFFKGFPKQVLPQP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 3hn8A | 0.25 | 0.15 | 4.62 | 0.52 | CEthreader | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKA-------------------DLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAAPHGREHWAEMLANPRKPVEHWHQLVEEKTLSS- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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