Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC DPVDFFLLVVVVGMVLMGIFFSTLFVFMDSGTWASSIFFHLMTCVLSLGVVLPWLHRLIRRNPLLWLLQFLFQTDTRIYLLAYWSLLATLACLVVLYQNAKRSSSESKKHQAPTIARKYFHLIVVATYIPGIIFDRPLLYVAATVCLAVFIFLEYVRYFRIKPLGHTLRSFLSLFLDERDSGPLI |
1 | 5jnqA | 0.09 | 0.09 | 3.34 | 0.51 | CEthreader | | SMIHETILAIIIAFAISALLCPIIIPFLHKLKFGTPTMGGLIILSSIIITSVFYIPSYPKIIPVLFVTVGFGIIQKLVGQFIITGIFAWYLLNSGEVGTDMLIPFTGGFDGGSFLSLGIFFVPALFFIMLGTDNGMGISPITGAVVGSLLGFLLFNVYPAKVFMGDTGSLALGGFVAASCYMMRM |
2 | 1ciiA | 0.02 | 0.02 | 1.39 | 0.57 | EigenThreader | | GFRTEIAGYDALRLHTESRMLFADADSLRISPREARSLIEQAEKRQKDAQNADKKAADMLAEYERRRNALTRAEQQLTQQKNNLNYLLSGLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLITSAESAVNSARNNLSARTNEQKHANDA--------LNALLKEKENIRNQLSGIN |
3 | 5tjvA1 | 0.13 | 0.12 | 4.29 | 0.93 | FFAS-3D | | -PSYHFIGSLAVADLLGSVIFVYSFIDFHVFHGGVTASFTASVGSLFLAAIDRYISIHRPLAYLMWTIAIVIDETYLMFWIGVTSVLLLFIVYAYMYILWKAGKRAMSFSDQARMDIRLAKTLVLILVVLIICWGPLLAIMVYDVIKTVFAFCSMLCLL-----NSTVNPIIYALRSKD------ |
4 | 3l1lA | 0.11 | 0.11 | 3.90 | 0.87 | SPARKS-K | | IPVTLMVSGAIMG---SGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWIQSTLNVTLWSFIGVESASVAA |
5 | 3l1lA | 0.11 | 0.10 | 3.70 | 0.99 | CNFpred | | --LIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG--AIQSTLNVTLWSFI--------- |
6 | 5oc9A | 0.08 | 0.07 | 2.75 | 1.00 | DEthreader | | AVEFIHFGETIALYFGFLEYFTFALIPMAIFNLIWSTVILELWKRGCANMTYWGTLL-M-K-R-KFE-EPNSIPLYPSYKRQLRIYVSLPFVCLCLYFSLYVMMIYMIYAIVIIMNRLYRYAAEFLTSWENH--R--LESAYQNLIGTFDDYLELFLQFYVSLFMSI------------------ |
7 | 6ei3A | 0.09 | 0.09 | 3.33 | 0.58 | MapAlign | | -FGAVVRSALLPGLALAAISVLLALACEQLGLVICLCMALVLLLAGIGGGTWWQLERAVDGVRALLRVLVILRRLGWEPSLRRMTSGIAFSGVAWIAVGAIMDGGEPMHIAWQILPYALLTFGEVLVSATGIEFKGVVMSFWYLTTTVGNLWVLLSNVAVTGLSEAAFLMFFFAAFAFLAALAFG |
8 | 5ezmA | 0.13 | 0.13 | 4.47 | 0.65 | MUSTER | | GSVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSIPGYIVPVI---ALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAV-PSVAVYAMGMYLGFTVALLGHETVGRPASGADIAPQIAQKLTP--EMPLY |
9 | 6c3iA | 0.11 | 0.10 | 3.53 | 0.56 | HHsearch | | GPGSAYLAVGIIGATVMPHVI---YLHSRIEEKRRLNRVDVGLAGLNMSMLAVAAATFHGKNTAYQTLTPLLGPAASLFAVALLASGLSSSAVGT-MAGDV--IMQGGFHIPL-WLRRLI-TMLPIVILLG--MDPSSVLILSQVILCFFALVPLLLFTARRDSALNGYLLWELLGG-------- |
10 | 3i9yA | 0.06 | 0.06 | 2.59 | 0.39 | CEthreader | | -SAMIEARQVSELSTRIISSVQMLSNAQNEQERKEAGRVLFEQLESLLTHIKELGGESFDSKLLDALESNVQNVERKLWLAKEIDTRVEEMRLLSEELEQLTRTLDLTERL-HELHLLAFKMLNQIEEARTLTNVDRIQQIQTAFENNLKIMKRRVLAVEDPTRSKQMSQLLTELGKRQVVFTIL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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