>Q9UPQ3 (253 residues) SQSEAMALQSIRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSL DLDDWPVELIKVMSSIGNELANSVWEESSQGRTKPSVDSTREEKERWIRAKYEQKLFLAP LPCTELSLGQHLLRATADEDLRTAILLLAHGSRDEVNETCGEGDGRTALHLACRKGNVVL AQLLIWYGVDVTARDAHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATPNLSRRNN NRNNSSGRVPTII |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | SQSEAMALQSIRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELIKVMSSIGNELANSVWEESSQGRTKPSVDSTREEKERWIRAKYEQKLFLAPLPCTELSLGQHLLRATADEDLRTAILLLAHGSRDEVNETCGEGDGRTALHLACRKGNVVLAQLLIWYGVDVTARDAHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATPNLSRRNNNRNNSSGRVPTII |
Prediction | CHHHHHHHHHHHHCCCCCSCCCCCCCCCCSSSSSCCSSSHHHHHHHHHCCCCCCCSSSSCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHCCCC |
Confidence | 8579999999983878780456899999779941456770322377642478764135546778999999999995871589999861665555544443477654355423232114566532110356778876506514567776524542234667787787589999997998888889980899988689999879999995999999999990998110122467660121268732666511239 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | SQSEAMALQSIRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELIKVMSSIGNELANSVWEESSQGRTKPSVDSTREEKERWIRAKYEQKLFLAPLPCTELSLGQHLLRATADEDLRTAILLLAHGSRDEVNETCGEGDGRTALHLACRKGNVVLAQLLIWYGVDVTARDAHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATPNLSRRNNNRNNSSGRVPTII |
Prediction | 8652341054027366153003062650410001000000130011034123413303104364034400420352214322421343253243322222243224223333323332342333323322222302334434223323331144323344657412000010033421220203021403043417533000000133424100100053304554354442341433465364022213546 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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SS Seq | CHHHHHHHHHHHHCCCCCSCCCCCCCCCCSSSSSCCSSSHHHHHHHHHCCCCCCCSSSSCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHCCCC SQSEAMALQSIRNMRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELIKVMSSIGNELANSVWEESSQGRTKPSVDSTREEKERWIRAKYEQKLFLAPLPCTELSLGQHLLRATADEDLRTAILLLAHGSRDEVNETCGEGDGRTALHLACRKGNVVLAQLLIWYGVDVTARDAHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATPNLSRRNNNRNNSSGRVPTII | |||||||||||||||||||
1 | 3jueA | 0.27 | 0.24 | 7.28 | 1.17 | DEthreader | ---VGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSG-IH-RSLGVSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVAMAVKKPG-PSCS-RQEKEAWIHAVEKKFLTKLP-L-HPGALLFRASGPPSLPTMADALAHGAD--VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGR--------------E------ | |||||||||||||
2 | 3jueA | 0.34 | 0.33 | 9.83 | 3.47 | SPARKS-K | ---VGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVEAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPLH---PGALLFRASGPPSLPTMADALAHGAD--VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA | |||||||||||||
3 | 3jueA | 0.35 | 0.33 | 9.81 | 1.03 | MapAlign | ---VGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKL---PLHPGALLFRASGPPSLPTMADALAHGA--DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVT----- | |||||||||||||
4 | 3jueA | 0.33 | 0.32 | 9.72 | 0.70 | CEthreader | ---VGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVMAVKKPGPSCSRQEKEAWIHAKYVEKKF---LTKLPLHPGALLFRAGHPPSLPTMADALAHGA--DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA | |||||||||||||
5 | 3jueA | 0.34 | 0.33 | 9.83 | 2.16 | MUSTER | ---VGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVEAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLP---LHPGALLFRASGPPSLPTMADALAHGA--DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDTIAMETANADIVTLLRLAKM | |||||||||||||
6 | 3lvqE | 0.29 | 0.28 | 8.55 | 2.12 | HHsearch | -DLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLALNMGNTSFNEVMEAQLPSGPKPSAESDMGTRRDYIMAKYVEHRFARRCTE-----PQRLWTAICNRDLLSVLEAFANGQ--DFGQPLAQAPEELVLHLAVKVANLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECMRAGKTV | |||||||||||||
7 | 1dcqA | 0.25 | 0.24 | 7.48 | 2.43 | FFAS-3D | ---TKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEEL---- | |||||||||||||
8 | 3jueA | 0.33 | 0.32 | 9.50 | 1.35 | EigenThreader | GH----VVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVMAVKKPGPSCSRQEKEAWIHAKYV---EKKFLTKLPLHPGALLFRASGPPSLPTMADALAHGA--DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA | |||||||||||||
9 | 3jueA | 0.37 | 0.33 | 9.75 | 2.50 | CNFpred | ------VVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVEAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLP---LHPGALLFRASGPPSLPTMADALAHGA--DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTI---------------- | |||||||||||||
10 | 3lvqE | 0.24 | 0.21 | 6.41 | 1.17 | DEthreader | -DLTKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTC---IQCSG-VHRELSRMQSLTLDLLGPSELLLALNMGNTSFNEVMEAQLPSGGPKP--SAESDMGTRRDYIMAKEHRFARRCT----EPQRLWTAICNRDLLSVLEAFANGQD--FGQPLPQAPEELVLHLAVKVASLPLVDFIIQGGHLDAKAA-DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG---------------K------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |