Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCSSSSSSSCCCSSSSSCCHHHHCCCCCCCSSSCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NVERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCSAQVSAVHISQTSNGGGSLSDYSSSVPSTPSTSQKELRIDVPPTANTPTPVRKQSKRRSNLFTSRKGSDPDKEKKGLESRADSIGSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLTYHPSLHDYMQNVHGKEIDLLRTTVKVPGKRPPRATSACAPISSPKTNGLSKDMSSLHISPNSGNVTSASGSQMASGISLVSFNSRPDGMHQRSYSVSSADQWSEATVIANSAISSDTGLGDSVCSSPSISSTTSPKLDPPPSPHANRKKHRRKKSTSNFKADGLSGTAEEQEENFEFIIVSLTGQTWHFEATTYEERDAWVQAIESQILASLQSCESSKNKSRLT |
1 | 2rloA | 0.76 | 0.25 | 7.08 | 1.03 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------RAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSAS-------------------------------------------------------------------------------------------------------------------------GSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ------------ |
2 | 6zywE | 0.11 | 0.09 | 3.10 | 1.22 | SPARKS-K | | ----------------SSKTLMLFKDEKEICKRSSWHPEGPTKVAVSYAIMRFQQMPEKMPTQAYVLLNPNSPEIKLMSPSAVTNISYNQKIPDYNGLLAVWDGRKGENPIMISPVENSHYEPV---------THFHWLMSKTG------SECVTTSTDGKV---------------MWWDIGGTALEYNVEAGPSKFLIGTESGSILTKKLKKPVEITTRYGLDQGRHLGPVYSIQNPKYFLSVGDWSEDLKTPIIRTKYHGSYLSDGCWSPTRSGAFLVRRDGWMDVWDYYYRQNEIAFSHKVSDS---------PLTCIKINQTGGAYHNSGK--LCAIGDQDGTILELYTMQPKEKDIINEMFE-------------------- |
3 | 2rloA | 0.76 | 0.25 | 7.08 | 1.37 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------RAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAGQA-------------------------------------------------------------------------------------------------------------------------EEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ------------ |
4 | 2pffB | 0.07 | 0.07 | 2.94 | 1.08 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGYKTKAAQDVWNRADNHFKDTYGFSILDIVINNP-- |
5 | 2rloA | 0.76 | 0.25 | 7.08 | 1.92 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------RAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSA------------------------------------------------------------------------------------------------S--------------GSA-----------GQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ------------ |
6 | 5jcss | 0.09 | 0.09 | 3.24 | 1.18 | SPARKS-K | | TVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDSYKYMNTKFISLNKDILFKNNGINKPDQLIIGEFKALSLDIASSRISLFLTQHVPTLENLDDSIKIGRLKEKLNIQKKSMNSTLFTNHSLRL---------------MEQISVCIQMTEPVLLV------GETGTGKTTVVQQLAKMLAKKVSQQTETGDLLGGYKPKTVAVPTLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWAEAQSSSIENSFVFNVEGSLVKTIRAGEWLLLDEVNLATADTLESISDLLTEPDSRSILLSEKGDAEPIKAHPDFRIFAC |
7 | 5wyjBC | 0.04 | 0.04 | 2.18 | 1.03 | MapAlign | | ---VPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKLLKTLPVNQQVESCGFLKDGDGKRIIYTAGGDAIFQLIDSESGSVLKRTNKPIEELFIIGVLPILSNSQMFLVLSDQTLQLINVEEDLKNDEDGNHGIIADMRYVGPELNKLALALWIATASKDNTAIVWRYNENSCKFDIYAKYIHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLDVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRLWALSTMDGDMIVSADMSKGTNAFLLAMPMRLFNVLKRALGESRSRQDTEE |
8 | 3fm8C | 0.14 | 0.11 | 3.78 | 1.64 | HHsearch | | MAKER-RRAVLELLQRP--GNARCADCGAP--DP--DWAS-YT-LGVFIGIHRNIP-QVSKVK-SVRLDAQVGNDRFESKVPSFRPTPSLLREQWKYERQEFIYPE----------------K-QEPYSAGYREGFLWKRGRD--NGQFLSRKFVLTREGALKYFN-------REPKAVMKIEHLNATFQPAKIGHPHGL--QVTYL-KDN--STR-NIFIHEDGKELRAAFPGASDADLPKLSRNYLKEGYMEK-----FRKRWF---TMDD----------RRLMYFK------DP-L--------DAFARGEVFIGSK--ESGYTVLHG-FPWPHGITIVT-PDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYA-VEAHF- |
9 | 7abiA | 0.11 | 0.10 | 3.45 | 1.17 | SPARKS-K | | VIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPP-----FDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFYRLANQLLTDLVDDNYFYLFDLKALNMAIPGGPKFELVRDINLQDEDWNEF-------------NDINKIIIRQPIRTFPYLYN------NLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKLKHRPPKAQKKRYLFRSFKATKF------------------FQSTKLD----W---VEVGLQVCRQGYNMRKNLNYLH |
10 | 3tfmA | 0.16 | 0.09 | 2.82 | 1.39 | HHsearch | | ---------------------------------------------------------------------PYFH-SFLYMN---G-----GLMNSWKRRW--CVLKDE--------TFL-----WFRSKQEALKQGWLHNNGGGSSRRNWKKRWFVL-RQSKLMYFENDSE---EKLKGTVEVRSAKEIIDNTNKENGIDIIMA-------D-----RTFHLI------AE---------------------------SPEDASQWFSVLSQVHSSTDQE---------IREMHD-------EQANPQN-AVGTLDVG-----LIDS-VCASDSPDRPNSFVIITA-NRVLHCNADTPEEMHHWITLLQRSK----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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