>Q9UPQ3 (216 residues) MNYQQQLANSAAIRAEIQRFESVHPNIYSIYELLERVEEPVLQNQIREHVIAIEDAFVNS QEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLL LIRDEGGPPEAQFAMWVDAVIFVFSLEDEISFQTVYHYYSRMANYRNTSEIPLVLVGTQD AISSANPRVIDDARARKLSNDLKRCTYYETCATYGL |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MNYQQQLANSAAIRAEIQRFESVHPNIYSIYELLERVEEPVLQNQIREHVIAIEDAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEDEISFQTVYHYYSRMANYRNTSEIPLVLVGTQDAISSANPRVIDDARARKLSNDLKRCTYYETCATYGL |
Prediction | CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSCCSSSSSSSSSCCCCCHHHHHHCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHCCCCSSSCCCCCCC |
Confidence | 986545788488998887403346315689999862356234445541456654111576567878898547999997999848999999963954786568766158999999999999998599994566641498899998589989999999999999996488898589996651146677862689999999998199827991257697 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MNYQQQLANSAAIRAEIQRFESVHPNIYSIYELLERVEEPVLQNQIREHVIAIEDAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEDEISFQTVYHYYSRMANYRNTSEIPLVLVGTQDAISSANPRVIDDARARKLSNDLKRCTYYETCATYGL |
Prediction | 754554364433034214425503530441253154365563455345434436533254773546753430000001133010000010004541376244344414140405645030101010234424102301000000001246006304501530372374740000000001005475624044730351076154022030003467 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSCCSSSSSSSSSCCCCCHHHHHHCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHHCCCCSSSCCCCCCC MNYQQQLANSAAIRAEIQRFESVHPNIYSIYELLERVEEPVLQNQIREHVIAIEDAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEDEISFQTVYHYYSRMANYRNTSEIPLVLVGTQDAISSANPRVIDDARARKLSNDLKRCTYYETCATYGL | |||||||||||||||||||
1 | 2wkpA | 0.17 | 0.16 | 5.18 | 1.17 | DEthreader | -L--AT-TLERIEKNFSSFLQLTEYCRFLQG-P--------ET-DRATVRIVLNFHLFIGVANIDEAAKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYITVFDNYSANVMVDGKPVNLGLWDTAGDLRPLSYPQTDVFLICFSLVSPASFHHVRKWYPEVRHHCP-N-TPIILVGTKLDLDKDTITPITYPQGLAMAKEIGAVKYLECSALTQR | |||||||||||||
2 | 3ihwA | 0.87 | 0.60 | 16.94 | 1.59 | SPARKS-K | ------------------------------------------------------------------FQGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGL | |||||||||||||
3 | 2wkpA | 0.20 | 0.19 | 6.07 | 0.58 | MapAlign | RFLQGPETDRATVRKIRDAIDNQTEVTLFHLQPM-RDQKGDVQYFIMLIKKTAENIDE--------AAKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTFDNYSANVMVDGKPVNLGLWDTAGLLRPLSYPQTDVFLICFSLVSPASFHHVRAWYPEVRHH--CPNTPIILVGTKLDLRDDKDTPITYPQGLAMAKEIGAVKYLECSALTQR | |||||||||||||
4 | 1n6oA | 0.21 | 0.14 | 4.56 | 0.38 | CEthreader | -----------------------------------------------------------------GNKICQFKLVLLGESKVGKSSLVLRFVKGQFHEFQESTAAFLTQTVCLDDTTVKFEIWDTAGQLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQA-SPNIVIALSGNKADL--ANKRAVDFQEAQSYADDN-SLLFMETSAKTSM | |||||||||||||
5 | 3ihwA | 0.87 | 0.60 | 16.94 | 1.48 | MUSTER | ------------------------------------------------------------------FQGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGL | |||||||||||||
6 | 2v55D | 0.18 | 0.12 | 4.06 | 0.96 | HHsearch | ------------------------------------------------------------------NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTFENYTASFEIDTQRIELSLWDTSGSPYYDSYPDSDAVLICFDISRPETLDSVKKWKGEIQEFC--PNTKMLLVGCKSDLRTDRQTPVSYDQGANMAKQIGAATYIECSALQSE | |||||||||||||
7 | 3ihwA | 0.87 | 0.60 | 16.94 | 2.28 | FFAS-3D | -------------------------------------------------------------------QGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGL | |||||||||||||
8 | 5jcpB | 0.15 | 0.14 | 4.68 | 0.70 | EigenThreader | EHFVEDVTDTLKRFFRELDDPVTSARLLPRWREAAELPQKNQRLEKYKDVIGCLQELIDGYISVFDIDAIRKKLVIVGDGACGKTCLLIVNS-------------NYVADIEVDGKQVELALWDTAGQLRPLSYPDTDVILMCFSIDSPDSLENIPEKTPEVKHFCPN--VPIILVGNKKELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKD | |||||||||||||
9 | 3ihwA | 0.88 | 0.60 | 16.93 | 1.35 | CNFpred | ---------------------------------------------------------------------PELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGL | |||||||||||||
10 | 5kszA | 0.12 | 0.10 | 3.58 | 1.00 | DEthreader | -----NHHAYLFLQSTFHLELLFKFPYIP------------------------DVQRCLYLASAVTVTRNVFRCNVIGVKNCGKSGVLQALLGRNLRQKIEHKSYYAINTVYVYGQEKYLLLHDISESFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQHFM-D--SRIPCLIVAAKSDL---HEVKQE-ISPTDFCRKHKMPPPQAFTCNTAP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |