Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCHHHHHHHHHCCCSSSSSCCCCSSCCCSSSSSSCCCCCCCSSSSSSSSSCCCCSSSSSCCCCCSSSCCCCCCCCCCCSSSCCCCCCCHHHHCCCCCCCCCSSCCCCCCCCCCCSSSCCCCSSSSSSSSSSSCCCCCCCCCCCCCCSSSSSCCCSSSSSSCHCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MEFTASPKPQLSSRANAFSIAALMSSGGSKEKEATENTIKPLEQFVEKSSCAQPLGELTSLDAHGEFGGGSGSSPSSSSLCTEPLIPTTPIIPSEEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDIERESVESLIQKHSYARSPIRTYGGEEDVLGDESQTTPNRGSAFTTSDNLSLSSWVSSSSSFPGFQHPQSLTALGTSTASIATPIPHPIQGSLPPYSRLGMPLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLRHSSAVMTPFV |
1 | 5a22A | 0.05 | 0.03 | 1.43 | 0.67 | DEthreader | | -----D-DNLRKNSLPVLLQANPISMWM-WLSDNHDASQGYSFLHEV-DK----------------------------------EAEIT-------------VV--E--FIRGWGNKPI-----------------------SE--KIMQTLSMVCRIDNL------------FSEQDIFTWSRVTCVTQIPTCANIMSSSTNALTVA----------FAENPINAMIQYGARLLHDPALR-Q-SLYEVQLHFKYLYSLSF-IHDVFSSRG-PLPAYLGAQSTA-LT--M-P---PTSYPT---------WGRESRGTRYRSILHGMGIVDLVQTETLTI-FIPDPFVNIETMQIFGVPT------------------GVSHAAALKSSDRPADLLTISLFYMI-QNVGIAITISFLSMELNPFNEILFNQL--------------- |
2 | 1h6fB | 0.62 | 0.26 | 7.42 | 2.72 | SPARKS-K | | ------------------------------------------------------------------------------------------------KDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHN--SRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAND----ILKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRD--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1h6fB | 0.62 | 0.26 | 7.36 | 1.03 | MapAlign | | ------------------------------------------------------------------------------------------------KDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAAD--DCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAN----DILKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFR---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1h6fB | 0.61 | 0.26 | 7.30 | 1.18 | CEthreader | | ------------------------------------------------------------------------------------------------KDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNS--RWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAN----DILKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRD--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 1h6fB | 0.63 | 0.26 | 7.42 | 1.53 | MUSTER | | ------------------------------------------------------------------------------------------------KDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFH---SRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAND----ILKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRD--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4a04A | 0.66 | 0.27 | 7.65 | 5.32 | HHsearch | | --------------------------------------------------------------------------------------------------GVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPR---------ENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRD--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4a04A | 0.66 | 0.27 | 7.65 | 2.37 | FFAS-3D | | --------------------------------------------------------------------------------------------------GVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPR---------ENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRD--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 5flvI | 0.28 | 0.14 | 4.24 | 0.78 | EigenThreader | | ------PRVLFSQAQVYELERRFKQQRYLS-----------APERDQLASVLKL-------------------------TSTQVKIWFQNRRYKSKRQRVF--LHERELWLKFHE-VGTEMIIT-KAGRFPSYKVVTG-LNPKTKYILLMDIVPADD--HRYKFADNKWSVTEP---AMPGRLYVHPDSPATGAHWMRQVSFQKLKLTNNHLDPFGHIIL--NSMHKYQ-PRLHIVK----------ADSTHVFPETAFIAVTSYQN--HKITQLKIENNPFAKGFR---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 1h6fA | 0.63 | 0.26 | 7.42 | 4.69 | CNFpred | | --------------------------------------------------------------------------------------------------DPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKKAKYILLMDIIAAD--DCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAN----DILKLPYSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRD--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3btaA | 0.04 | 0.02 | 1.29 | 0.67 | DEthreader | | -------------------------VNKVDIFKIHNKIWVIPERDTFTNEEGDLNP-PPEA--------------------ADIQFECKSFGHEVLNLTRNIAIN-NRVFKVNTNYEMLV-----FGGHDAKIEFRYNKFDIASTL-----------------------------------------EKYLLSVDKKFDKYKTEIYTEDNF-VKFFKVLNRKTLNFD-----------DNEPENISILIG-LELMPNI--A-NTQIDLIRLNQCSVSLMLSVLLSTFTEYINI--NLRYESNHL--------------------------------FDPIDKNQQRPNRWIFYQSNSILKDFW---GDYLQKPYYMLNLY-P--IYLNSSLYRGTK-FIIKKYADNIVRNNDR-VYINVVVLSA-KL----I-----ERPL------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|