Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCSSSSSSSSSSSSSSCCCCCCHHHHSSCCCCSCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCSSSCCCCCCCCHHHCCCCCCCCC ENITFYQNQEDFSTVSSKEGVMVQTSGKSHAASDAPENLTLLAETADARGRSGSSSRTNFTILPVGYSLEIATALTSQSGNLASESLHLPSSSSEFDERIAAFQTKSGTASEMGTERAMGLSEEWTVHSQEATTSAWSPSFLPALEMGELTTPSRKRNSSGPDLSWLHFYRTAASSPLLDLSSSSESTEKLNNSTGLQSSSVSQTKTMHVATVFTDGAPMRGGEITAHWLLTNSTTSADVTGSSASYPEGVNASVLTQFSDSTVQSGGSHTALGDRSYSESSSTSSSESLNSSAPRGERSIAGISYGGNPYQLITVVIAAAGGGLLLILGIALIVTCCRKNKNDISKLIFKSGDFQMSPYAEYPKNPRSQEWGREAIEMHENGSTKNLLQMTDVYYSPTSVRNPELERNGLYPAYT |
1 | 1vt4I3 | 0.08 | 0.07 | 2.98 | 0.67 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------- |
2 | 2xm6A | 0.04 | 0.04 | 2.04 | 0.82 | EigenThreader | | KQKAESGEAKAQLELGYRYFQG------------NETTKDLTQAMDWFRRAAEQGYTPAEY-----VLGLRYMNGEGVPQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGV-----KVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNSRGLGVERNDAISAQWYRKSATSGDELGQLHLAD------MYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKRKAAEQGLSAAQVQLGEIYYYGLGVAWFDTASTNDMNLFGTENRNITEKKLTAKQL |
3 | 7cvyG | 0.13 | 0.11 | 3.69 | 0.46 | FFAS-3D | | -NFNVYKATRPYSPVATDGTLKIQVSLQIGIGTDDSHDWTKLRYMDNHIPADAGRAGLFVRTCPKGETLTVGFTDSRKISHSGREKFHSRPQHGKELPCSTYVQSNAATAEEIEVHMPPDTPDRTLLSQQSGNVKITVNGRTVRYKGSNEGLITTDKVINNCKVDQCHAAVTNHKKWQYNSPLVPRNAELGDRKGKIRIPFPLANVTCMVPK--ARNPTVTYGKNQVIMLLYPDHPTLLSYRSMGEEPNYQEEWVTHKKEVVLTVPTEGLEVTWGNNEPYKYWPQLSAN---GTAHGPHEIILYYYELYPTMTVVVVSVAS---FILLSMVGMAVGMCMCARRR------CITPYELTPGATVP---------------------------------------------------- |
4 | 6f1tg | 0.10 | 0.08 | 3.15 | 1.00 | SPARKS-K | | ------------------------LTEEEKQQILHSEEFLSFFDHSTRIINIKLSLNRQFFDERWSKHRVVSCLDWSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQ-NAHNLISISTDGSWSLDMLSHPQDSMELVHKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMHQGPITGHCHAAVGAV------DFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDN--AGYVYDV---MWSPTHPALFACVD------------GMGRLDLWNLNNDTEVPTASISVEGNPALN---RVRWTHSGREIAVGGQIVIYDVGEQIAVPRNDEWARFGRTL |
5 | 4f55A | 0.17 | 0.04 | 1.27 | 0.38 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDIQLMANAVYG-YLGQVAVAAVILNRVTSASFPNTVSGVIFEPRAFTAVADGQIYLT--PNETAKKAVLDAINGW--DPTGNALYYFNPDTATSKWIWT-------- |
6 | 1llwA | 0.08 | 0.06 | 2.16 | 0.67 | DEthreader | | VVVELCEGCAELRRYARSIIGKK-----------------------MAREKLTKA-E-EALTIVNNYNLDSALELLVRTGRSLEA-M------YKNQPALKYPI--HALLVFSGIVGAIVLEKGRLA--PG-------------------QMIAVDLAEQKILYQIKQAYGWIQFGKLEQAIKTQVAEVSTL--YD-LDGVNSLEDTNLVKATVAEILVLT-R---FIPPLLAVGAVHSLIVDTAQC---ACLVGYGASA------------------LLASYHGAQIFEAFTTSRVGGKPGEGGQRTLISGGTGASPLS-I------GGLK-GFGSIA--M-IAEGCIMAR-----CPVGVATQQERLRQRFK-------------------------G-T-------------- |
7 | 1vt4I | 0.08 | 0.08 | 3.07 | 1.39 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
8 | 1vw1A | 0.12 | 0.12 | 4.17 | 0.79 | MUSTER | | SELKLEKNRAPYCAGYQGEDTLLVMFYNQQDTLDSYKNASMQGLYIFADMASKDMTPEQSNVYRDNSYQQFDTNNVRRVNNRYAEDYEIPSSVSSRKDYGWGDYYLSMVYNGDIPTINYKAASYISPKLRIIHNGYEGQKRNQCNLMNKYGKLGDKVNPNNSSNKLMFYPVYQYSGNTSGLNQGRLLFHRDTTYPSKVEAWIPGAKRSLTNQNAAIGDDYATDSLNKPDDLKQYIFMTDSKGTATDVPVEINTAISPAKVQIIVKAGGKEQTFTADKDVSIQPSPSFDEMNYQFNALEIDGSGLNFINNSASIDVTFTAFAEDGRKLGYESFSIPVTLKVSTDNALTLHHNENGAQYMQWQSYRT--RNTLFARQLVARA-TTGIDTILSMEKGFYATFVIPPYNLSTHGDERWFK |
9 | 6c4nA2 | 0.16 | 0.03 | 1.11 | 0.40 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTTYVHSPF-FLGEFAARILSEQGPPGFMYKLYPEGPITPGAIGAMLLRRMGAEPLNLLRLNDDNYPETMLPRASIDGFLLFVRYA |
10 | 6n2nA | 0.10 | 0.10 | 3.51 | 0.38 | CEthreader | | TAFVYDYPGGDFEPDEIPEGVFAYPIPMSQTAKEMKSYRSKNMVALGALSELFNISENTLKEVLSDKFGKKGEEVLAFNLEAFDKGKALAKALTKADPFRVADPQEPKDVIIMAGNDAVGLGGILGGLEFFSLPKCGGDLVQAEDEIASIAQVLGASYAGKKSMTATSGPGLALMSEMLGMAHMSETPCLVVDVQRGGPSTGLPTKHEQSDLFLAIHGGHGDSPRIVLSVEDVKDCISMTVDGLNLAEKYQAPVIVLSPKPEDFTIINRKTWDGQGTYKRYELTEDNISPMASVLDFYKNMEVEGVEGEADVGIITWGSTIGDYDAFGATCKKVIVPEVNFQGQLSHFIRAETSIKPIPYTICGGLPFTPEMIVNRVKEEIQ---------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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