Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCSSSSCCCCCCCCCCCCCCCCCCCCCCHHHCSSCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC ARSQYVCRLYRSDSDSSTLPRKSPFVRNTLERRTLRYKQSCRSSLAELMARTSLDLELDLQASRTRQRQLNEELCALRELRQRLEDAQLRGQTDLPPWVLRDERLRGLLREAERQTRQTKLDYRHEQAAEKMLKKASKEIYQLRGQSHKEPIQVQTFREKIAFFTRPRINIPPLPADDV |
1 | 5cwqA | 0.09 | 0.09 | 3.40 | 0.62 | CEthreader | | ELAEALIEEARAVQELARVACERGEAERASEKAQRVLEEARKVSEEAREQGDDAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDE--VLALALIAIALAVLALAEVACCRG-NKEEAERAYEDARRVEEEARKVKESAEEDSEVKRLAEEAEQLAREARRHVQECRGGWL |
2 | 7d6dA | 0.06 | 0.06 | 2.62 | 0.60 | EigenThreader | | -------FDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFSDFLGLYEKLSEKHSQNVREFLEKFNKATDAVSKWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTALFALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQA |
3 | 3na7A1 | 0.16 | 0.09 | 2.98 | 0.71 | FFAS-3D | | ------------------------------------------------------KALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKE-------MLELEKLAL----------------- |
4 | 6egcA | 0.20 | 0.14 | 4.46 | 0.69 | SPARKS-K | | ------------------------------------------------------TRTEIIRELERSLREQEELAKRLKELLRELERLQREGSSDLREIKELVEEIEKLAREQKYLVEELKRQGREQEELAKRLKELLRELERLQREGSSDEREIKELVEEIEKLAREQKYLVEELKRQ- |
5 | 5j1gA | 0.22 | 0.12 | 3.89 | 0.54 | CNFpred | | -------------------------------------------------------YLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQA-VPATLPELEATKASLKKLRAQAEAQQ-------PTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLL-------------- |
6 | 4i3hA | 0.11 | 0.09 | 3.40 | 0.83 | DEthreader | | ---KEILTPVLY--FEG-EDNGF--Q-VEV-AL--QYNDGSKPNE-LYLVELPL-RGKDGHIY--IDRALP-GLNRLVNGPPHNLAEVIDAMEFLPIKAYETGVGVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDVII--KLFTEEQAE----------A-IIGD |
7 | 5cwqA | 0.09 | 0.09 | 3.40 | 1.08 | MapAlign | | SEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACRGNSEEAERASEKAQRVLEEARKVSALIAIALAVLALAEVACCRGNSEEAERASE--KAQRVLEEARKVSEEARGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGD |
8 | 4cgkA | 0.13 | 0.13 | 4.46 | 0.65 | MUSTER | | ARSAQ--TNGAVTSYINTIVNSKSITEAISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKATAEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAAAPVRAKVRPTYSTNA |
9 | 2p0tA2 | 0.18 | 0.07 | 2.18 | 0.58 | HHsearch | | ------------------------------------------------------------------------YNERFHNLERWRDRLIAGDDADLEKFVIEYQQLRSLIRQAQHEVARNKP------------PATSRKIFKYIRELDELQ---------------------------- |
10 | 7b5lH | 0.08 | 0.08 | 3.26 | 0.49 | CEthreader | | ECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSLKKAVDVLCQCRATLMYTYVFAFKNNQSIIFENNQADLENATEVLSGYLERDIIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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