Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCHHHHHHHHHHCCCCCCCSSSSSCCCCCCCHHHHHHHHHHHHHCCCCSSSSCHHHHCCHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMFRREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRTVSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPGALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAALQQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKRVLSGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATLGPDRESLEGLEVAPRPPARITGVGAVPLPASGNSFDARPSQGYRRRRGRGQHRRGGVARAGSRGSRKRKRHTFCYSCGEDGHIRVQCINPSNLLLVKQKKQAAVESGNGNWAWDKSHPKSKAK |
1 | 4m8oA | 0.06 | 0.06 | 2.49 | 1.16 | MapAlign | | LNASKIDDIDSMMGFERYDPYFFIACN---DESRVNDVEELVKKYLCLKSLQIIRKELGLQKTLIKLSFQLFEARKLLKVDAKHLIEDIREYRVENDEVALLQRFFEHILPQGSQGLKAVTQSKLGYNPMTPYAFEKPQHLSEYSVSDAVATYYLYMKYVHSLEAGVFRSDLKNEFKIDPSAIDELLQELPEALEIKNQITQKLLELKSKMDEYNMIKRALQLSYADQVIHIKKRLTEYSSFRDRRYEFKGLAKTWKGITCLTGATIIQMARALVERVGIWCILPLSYPCSMLNYRVLKRRGELQLIKNFQSDIFKVFLEGTLEGCYSAVASVCNRWL-------DVLDSHGLMLEDEDLVSLICENRSMSKTLKEYEGQKSTSITTARRLGDFLGEDMVKDKGLQCKYIISSKPFNAPVTERAIIIDWGYYRERLGSAIQKITIPAALQGVSNPVPRVEHP- |
2 | 6taqB | 0.18 | 0.06 | 2.05 | 1.40 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------KGSFSNCTVRFSGQR----DHDAVDEFINAVETYKEVEGISDKDALKGLPLLFKSIAVVWWKGVR--RDAKTWSDALQLLRDHFSPTKPSYQIYMEIFETKQSYDEVIDSFICKQRALLAKLPEG-R----HDEETELDFIYGLMQPK--YRESI----PRHEVKTFRELLDRGRTVERTR------------------------------------------------------------------------------------------------------------------------------ |
3 | 4n0tA | 0.09 | 0.07 | 2.76 | 0.54 | CEthreader | | -------------RNRELTTVLVKNLPKSYN----QNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVGQNEIIVSHLTECTLWMTNFPPSYTQRNQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNPLEKSKRTDSATLEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCC------AFMVFENKDSAERALQMNRSLLGNREISVSLADKKPFLERNEVKRLLASRNSKELETLICLFPLSDKVSPSLICQFLQEEIHINEKDIRKILLVSDFNGAIIIFRDSKFAAKMLMILNGSQFQGKVIRSGTINDMKRYYNNQQ---------------------------------------------------------------------------------- |
4 | 4n0tA | 0.06 | 0.03 | 1.42 | 0.85 | EigenThreader | | -------------RNRELTTVLVKNLPKSYNQNKVYKYFKHCG---PIIHVD-VADSLKKNFRFARIEFARYDGALAAITKTHKVQNEIIVSHLT----------------------------------------------------------------ECTLWMTNFPPS------YTQRNIRDLLQDI---NVVSKEDARYCVEKLNGLE----------KSKRTDSATLE--------GRLLDENLLRESFEGFGSPAG-------------------QKEHS--------------FNNNKDSAERALQMN---RDKKPFLERNEVKRLLA----------------------------------------------------SRNSKELETLSDKVSPSLICQFLQEEIHINEKDIIFRDSKFAAKMLMILNNDMKRYYNNQQ--------------- |
5 | 6tapA | 0.15 | 0.05 | 1.75 | 1.00 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------KGNFSACHSFGGTR----DHDVVEEFIGNIETYKDVEGISDENALKGISLLFYGMASTWWQGVRKEATTW--KEAIALIREHFSPTKPAYQIYMEFFQNKQDDHDPIDTFVIQKRALLAQLPSGRH-----DEETELDLLFGL------LNIKYRKHISRHSVHTFKDLLEQGRIIEH-------------------------------------------------------------------------------------------------------------------------------- |
6 | 7abiM | 0.09 | 0.08 | 2.84 | 0.63 | SPARKS-K | | ---------------------------------------------------------------FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALP--ITQH------SRIWPLYLRFSHPLPETAVRGYRRFLKSAEEYIEYLKSSDRL---DEAAQRLATVVNDERNYQLWHELCDLISQNPDKVQS---LNVDAIIRGGLTRFTDQLGKLWCSLADYYIRS-GHFEKARDVYEEAIRTMTVRDFTQVFDSYAQFEESETASELGREEEDDVDLEARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFK----------------ATGKPHTLWVAFAKFYEDNGQLDDARKATKVNFKQV |
7 | 4uqiA | 0.11 | 0.06 | 2.28 | 0.73 | CNFpred | | AATSLITTLAQKN---PEEFKTSV--------SLAVSRLSRIVTSA-QDYTYYFVPAP--WLSVKLLRLL--------------------QCYPPP-EDPAVRGRLTECL-------ETILNKAQEPPKSK-----KVQHSNAKNAVLFEAISLIIHHDS------------------EPNLLVRACNQLGQFLQHRETNLRYLALESMC-HIETVINALKTERDVSVRQRAVDLLYAMCDR-SNAQQIVAEMLSYLETA---DYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGYVSEEVWYRVIQIVINRQGYAAKTVFEALQAPACHENLVK-------------------------------------------------------------------------------------------------------------------------- |
8 | 6sytA | 0.07 | 0.05 | 2.10 | 0.67 | DEthreader | | EFIPSSKLLFLRYHKEV----ETCALNNLLHSLQL-------------NVDNAKFVVIFDL-----------------------------------------------------------------------------------------HFPAIQYAVLYTLYCTHDHFIS------HFSIILNLLGILLKKDNLNQDTRKLLMTWALEAAVLRCGLLANTLVEDVNICLQACSSLHALSSSLPD-LLSIPLDVVLSNEGRSIAPVLSTLQLYCSSALE---SNLSTEDCLIPLFSEALWM----M--NQ-LEIKEQTVPIR-HLM-LGL-TRLLAQCSETTAQDLVQHKQTHAMLTLAKWIQAEWISQSTLSKNILLIILGQYLWARWGRVVVVDFYLHALLLVRSICLLVAQDSP-HLILYPAIYIVDKLSSANPTMV------TE--VTIHSLGSD--- |
9 | 6fijA | 0.08 | 0.08 | 3.03 | 1.05 | MapAlign | | RAPAVLKAELAWEIGSCLAASWTSAVGG-ISPQDLQDRISAYTAELASVSVPYLSAAVGPGQSSVSAAP--VI-LDAFLSTLLRPLTTTRLITAPDRMAVSIANHQFWDVLINGVDTALLTATENYFHKFSGPSYTIDTACSSSLAALHMACNALWRGEVILGIATNHSAEAASITRPHAGAQQDLFQQVLTEGTGTQAGDSGETTSSMVNNLTNMITWIRAVATGTDLLQIRSSLQEQLKRFASFRSDIARYDQITASPTLQQLTHVCFQMALYAALYAAGVLSQSDTLYLVGRRAQLVRAKEEAIVAAYEFSCRNVLGGTVAQIQAAKAALEALQVAAACSIQDPQIPVISPAYGKVIRSAKDFQPEYFTHHCRSSVNMVDALQSAVEEGLLDKNVIGLEIGPGPVVTQFVKEAVGTTMQTFASINKDKDTWQLMTQALAKFYLAGASVEWSRYHEDFPGA |
10 | 1st6A | 0.12 | 0.11 | 3.96 | 0.64 | MUSTER | | NACTKLVRAAQMLQADPYRGILLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETM-LTHQEHRVMLVNSMNTVKELL---TTKNTKSQ---------GIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEAWASKDTEAMKRALALIDSKMNQAKGWLRD------PNAPPGDAGEQAIRQILDEAGKAGELCAGKERREILGTCKTL-GQMTDQLADLRARGQGATPMAMQKAQQVSQG----LDLLTAKVENAA-----KLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIR-----GIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRLANVMMGPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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