Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
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| SS Seq | CSSSSSCCCCCSSSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCSSSSCCCSSSSCCCCCCCCCSSSSSSSSCCCCCCCSSSSSSSSSSSCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCSCCCCCCCCSSCCCCCSSSSSCCSSSSSSSCCCSSSSSSCCCSSSCCCCSHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHCCCSSSSSCCCCCCCCSSSSCCCCCCCCCCSSSSSCCCCCCCCSSSHHHHHHHHHCCCCCCCCCCSSSCCCCCCCCSCCCSSSSSCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCSSCCCC NYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDM |
1 | 4ei1A | 0.71 | 0.67 | 18.93 | 1.33 | DEthreader | | NFFEMDI-PKIDIYHYELDIK-PEKCPVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPI--GRDKVELEVTR---I-FKVSIKWVSCVSL-QALHDAL--SGRLVPFETIQALDVVMRHLPSMRYTPVGRSFFTA-SS--NPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSI--EQKPLTDSQRVKFTKEIKGLKVEIT------RKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQE--HTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVKDEM |
2 | 4ei1A | 0.78 | 0.74 | 20.80 | 3.42 | SPARKS-K | | NFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDK---VELEVTR----IFKVSIKWVSCVSLQALHDALSGRL--VPFETIQALDVVMRHLPSMRYTPVGRSFFTASS---NPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSI--EQKPLTDSQRVKFTKEIKGLKVEIT------RKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQEH--TYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVKDEM |
3 | 4ei1A | 0.78 | 0.74 | 20.80 | 2.03 | MapAlign | | NFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPI-GRDKVELEVT------RIFKVSIKWVSCVSLQALHDALSGR--LVPFETIQALDVVMRHLPSMRYTPVGRSFFTA---SSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSI--EQKPLTDSQRVKFTKEIKGLKVEIT------RKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQ--EHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVKDEM |
4 | 4ei1A | 0.80 | 0.75 | 21.17 | 1.75 | CEthreader | | NFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVT-------RIFKVSIKWVSCVSLQALHDALSGRL--VPFETIQALDVVMRHLPSMRYTPVGRSFFTAS---SNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIE--QKPLTDSQRVKFTKEIKGLKVEIT------RKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQ--EHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVKDEM |
5 | 4ei1A | 0.80 | 0.75 | 21.17 | 2.54 | MUSTER | | NFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEV-------TRIFKVSIKWVSCVSLQALHDALSGR--LVPFETIQALDVVMRHLPSMRYTPVGRSFFTASS---NPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIE--QKPLTDSQRVKFTKEIKGLKVEIT------RKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQE--HTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVKDEM |
6 | 4ei1A | 0.79 | 0.74 | 21.02 | 4.30 | HHsearch | | NFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRD--KVELEV-----TRIFKVSIKWVSCVSLQALHDALSGRL--VPFETIQALDVVMRHLPSMRYTPVGRSFFTAS---SNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSI--EQKPLTDSQRVKFTKEIKGLKVEIT------RKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQE--HTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVKDEM |
7 | 6kr6A1 | 0.17 | 0.14 | 4.53 | 2.67 | FFAS-3D | | NFFRLKTPEWRIVHYHVEFEPSIENPRVRMGVLSNHANLL------GSGYLFDGLQ-LFTTRKFEQE-----ITVLSGKSKLDIEYKISIKFVGFIS-------------CAEPRFLQVLNLILRRSMKGLNLELVGRNLFDPRAKIEIREFKMELWPGYETSIRQHEKDILLGTEITHKVMRTETIYDIM------------------RRCSDEVRVNVLDLIVLT---DYNNRTYRINDVDFGQTPKSTFS-----CKGRDISFVEYYLTKYNIRIRDHNQPLLI------SVVLIPELCRV----------NFQLMRAMSSYTRMNPKQRTDRLRAFNHRLQNTPEKVLRDWNMELDKNV |
8 | 4ei1A | 0.72 | 0.64 | 18.07 | 1.92 | EigenThreader | | GFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVT------RIFKVSIKWVSVSLQALHDAL----SGRLVPFETIQALDVVMRHLPSMRYAS----------------SNGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDF--KSIEQKPLTDSQRVKFTKEIKGLKVEIT-------RNVTRRP----ASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQ--EHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSADFNTDPYVREFGIMVKDEM |
9 | 4kxtA | 1.00 | 0.96 | 26.92 | 4.69 | CNFpred | | NYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVD--------------KVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDM |
10 | 4f1nA | 0.17 | 0.15 | 4.91 | 1.17 | DEthreader | | NHILLAVDGKTAFIFTYHIDFKLKKYELIEALLDEDEILYKY-----RDRIAFNGTIYSH---V-P---LEEFTLFD----EEMVSITLKFSGKVGLK-DIYNDTTTQDVQSRAIDKTCLLSLLGAKFMSTIFQVQGKFFIFNFAKAIPFQIGGYLLQGFTVSLTHVYGGVALNTVSVPAPFIKHFTLMDWIIECYHPKTAPPPSVKDLNYFVKNISALLKGLKVYRPY-IN-RSSKGIVGFTRESAVS-M------------RNTIDYFKRKYDITLKYPDMKLVNLG--GKNDVVPPECLTIVPGQKLKGQI-F-DTKTYIDFSAIRPTEKFDLISRLSMPA-IK-R-GLTDS-NSAYQFM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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