Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MSVQSSSGSLEGPPSWSQLSTSPTPGSAAAARSLLNHTPPSGRPREGAMDELHSLDPRRQELLEARFTGVASGSTGSTGSCSVGAKASTNNESSNHSFGSLGSLSDKESETPEKKQSESSRGRKRKAENQNESSQGKSIGGRGHKISDYFEYQGGNGSSPVRGIPPAIRSPQNSHSHSTPSSSVRPNSPSPTALAFGDHPIVQPKQLSFKIIQTDLTMLKLAALESNKIQDLEKKEGRIDDLLRAN |
1 | 1vt4I3 | 0.09 | 0.09 | 3.52 | 1.20 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 4nl6A | 0.09 | 0.08 | 3.11 | 1.10 | SPARKS-K | | KAVASFKHALKNGDICETSGKPKTTPKRKPNTAASLQQWKVGDKCSAIWSEDGC-------------IYPATIASIDFKRETCVVVYEQNLSDLLSPICEVANNIEQQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN-------- |
3 | 1vt4I3 | 0.09 | 0.09 | 3.40 | 1.50 | MapAlign | | -FDSDDLIPPYIEHPERMTLFRMVFLDFRFLEQKIGSILNTLQQLKFYKPYICDNDPKYERLVNAILDGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--- |
4 | 1vt4I | 0.09 | 0.09 | 3.52 | 0.74 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 2p03A | 0.07 | 0.07 | 2.96 | 0.62 | EigenThreader | | GEEFRMEKLNQLWEKAQRLHLPPVRLAELHADLKIQERD-----ELAWKKLKLDGLDIRNLNVILAKYGLDGKKDARQVTLWHKAKTSGKFSGEELDKLWREFLHHKEKVHEYNVLLETLSRTEEILSDIKGSVLHSRHTELKEKLRSINQGLDRLRRVSHQGYSTEAEFEEPRVIDLWDLAQSANLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKLRHAESVGSRSREKHALLEGRTKE |
6 | 5x6oG | 0.13 | 0.11 | 3.96 | 0.40 | FFAS-3D | | ----SSDDDDDIPPRFTQITQIPTTLEVTTTTLNNKQSKNDNQVNQGEASMLRDLVKHLQELAKLKQELQKLEDEKKFLQRGKSKREVITNVKPPSTTLNTITPDSSSVAIEAKPQSPQSKKRKISDNNMVPLNPNRIIPDETSLFLESILLHQIIGAD-----------------------LSTIEILNRLKLDYITEFKFKNFVIAKGAPIGKSIVSLLLRCKKTLTLDIDTLLEDIAVLIKE- |
7 | 5yfpB | 0.10 | 0.10 | 3.63 | 1.05 | SPARKS-K | | NFIKNTTSSSNENPILRWMSIKELSGHMISKIIHSQRLQNNTNQDKSQGCVELSYYLKINQLFQIISDTGKDEGLKSTVEPNKVNTISGTSYLNLNCQPSSQGLTDSPDGTYQNSIINEKRKENILIGDSNIIESYQKSLILKEEQINEVRLKGEEFITSVSQNLISFFTSSQSSLPSSLKDSTGDITRSNKDSGSPLDYG--FIPPNCNGLSCLRYLPKIVEPILKFSTELAQLNNGITICRNTL |
8 | 3pasA | 0.12 | 0.04 | 1.57 | 0.22 | CNFpred | | ----------------------------------------------------QRDDSKRIAFLEATVREVAD-------HGFSATSVGKIAKAAGLSPA---------------------------------------------TLYIYYEDK----------------------------------------------------EQLLLATFYYVSDQVIDAALDSFSRG--DLREGLRRQWHTL |
9 | 7by5A | 0.06 | 0.04 | 1.77 | 0.67 | DEthreader | | ---T------DR---LLDKIINAMAQLIAVLHGLYGMQDI-KLVYKQIYQQQFDKNEDKFQILYNSIMYGFPLNF-E-YEKWIEVYKLV-KAKWLG-------VNTQFQKRSYMYRSEYQVD-------------ANKAMININIFMSSSFLNQINAKIPFSSVVHKISSVSLKGNCN-NGKLNIY-YRRLNG-GTHDLIASNWY----------------------------------------- |
10 | 2pffA1 | 0.06 | 0.06 | 2.54 | 1.11 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVLITGAGKGSIGAEVLQGLLQGGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLLPMSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLELCQKSPVMADLNGGLQFVPELKEFTAKLRKELVETSEVRKAVSIETALEHKVV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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