Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCSSSSCCCCCCCHHHHHHHHHHCCCCCSSSSCCCCCCHHHHHHHHHHCCCCCCCSSSCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCSSCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHCHHSCCCCCCCCCHHHHHHHHHHCHHHHCSSCCCCCCCCCHHHHHHHHHCCCCCCCCSSSCCCCCCCCHHHHHHHHHHCCCCCSSSCCCCCCCCHHHHHHHHCCCCCCSSSSSCCCCCC NHAEERQKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLKTSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVWMLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCASPAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVLLFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASGCQNLQCGFRACCRSGE |
1 | 5hb4B | 0.06 | 0.05 | 2.08 | 0.83 | DEthreader | | -----------------------------EI-PE--LEPHRLRACIFYMMFREFGT-----G--F----EQSNAFIQLLTTLLVPPEGLLNDSV-F---PE-WL-GSSIRT----------------------LGIEPYVDFVFDVFANRTKDISDPLRRLLVMVCLVMLFNKVITSLINTIHQILAQVIKALQESAFEDGILSHLSLVDLYLTACKLLEKISTSRILWKAIQLEISLVLAILDFLYACLRATPDQPTIAHQLLG-------------------------------LFHSLLNVLITLT--VSEEEQGMRGYLVTLKYVLLLMLLREVQI------QPQLPWLVAYIDYLASRAAIFEYIGALNG-IPSIFDFFDFINLLTRLNLLQAWANLLIFLLLQILPTLEAFSSLKSDAFEARKVLWKLIGKLFQLFQLCLSASGTPERSYSYRTAVVARRTLAITYLLNVICDAMILNAL-HTSRASS-CPIIALLFLAKALLLQ------ |
2 | 6o60C | 0.20 | 0.15 | 4.71 | 1.73 | SPARKS-K | | ---------------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDL---------------FNFQTGRVVENISKRCGGFLRKLSRGCI---------------------GVGDSSLKTFAQNC-RNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCSITNSSLKGISEGC--RNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQ--SCSRITDEGVVQICRGC------------HRLQALCLSGCSNLT-DASLTALGLNCPRLQILEAAR----------CSHLTDAGFTLLARNC---HELEKMDLEECILITD-----------STLIQLSIHCP--------------------KLQALSLSHCELITDDGILHLSNSTCGHRLRVLELDNCLLITDVALEHLE-NCRGLERLELYDCQQVTAGIKRMRAQLPHVKVHAYF------ |
3 | 6o60C | 0.24 | 0.15 | 4.83 | 0.74 | MapAlign | | ----------------------------LINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLF--------------------------------------------------------------NFQTGRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCKITDSTCYSLS--RFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVR-----------------------------------------GCRGLKALLLRGCTQLEDEALKHIQN---YCHELVSLNLQSCS-------RITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGL----------------------------------NCPRLQILEAARCSHLTDAGFTLLAR--NCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCLRVLELDNCLLIT |
4 | 6o60C | 0.20 | 0.14 | 4.57 | 0.49 | CEthreader | | ---------------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQT--------------------------------------------------------------GRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLS-RFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGC--------------TQLEDEALKHIQNYCHELVSLNLQSCSRIT-DEGVVQICRGCHRLQALCLSGCSN---------------------------------------LTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARN-----CHELEKMDLEECILITDSTLIQLSIH--CPKLQALSLSHCELITDDGILHLSNSTERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVT |
5 | 6o60C | 0.22 | 0.16 | 5.14 | 1.41 | MUSTER | | ---------------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDL-------------FNFQTGRVVENISKRCGGF------LRKLSLRGCIG----------------VGDSSLKTFAQN-CRNIEHLNLNGCTKITDSTCYSLSRFCSKLKHLDLTSCSITNSSLKGISEG--CRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQ--SCSRITDEGVVQICRG------------CHRLQALCLSGCSNLT-DASLTALGLNCPRLQILEAA--------RCSH--LTDAGFTLLAR-NCHELEKMDLEECILITDSTLIQLS---------------------------------IHCPKLQALSLSHCELITDDGILHLSNSCGHERLRVLELDNCLLITDVALEHLEN-CRGLERLELYDCQQVTRAGIKRMRA--QLPHVKVHAYF--- |
6 | 6o60C | 0.22 | 0.16 | 5.12 | 1.81 | HHsearch | | ---------------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQT--------------------------------------------------------------GRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCKITDSTCYSLSR--FCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYSWCDQIT-K--DGIEALVRGCRGLKALLLR--GCTQLEDEALKHIQN------------YCHELVSLNLQSCSR--ITDEGVQICRGCHRLQALCL--------SGCSN--LTDASLTALGL-NCPRLQILEAA--RCSHTDGFTLLA--RNCHELEKMDLEECILITDS----TLI-QLSIHCPKLQALSLSHCELITDDGILHLSNSTGHERLRVLELDNCLLITDVALEHLE-NCRGLERLELYDCQQVTRAGKRMRAQLPHVKVHAYF------ |
7 | 6o60C | 0.24 | 0.18 | 5.54 | 2.16 | FFAS-3D | | ------------------------------NKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTG--------------------------------------------------------------RVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCKITDSTCYSLSRF--CSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKHIQNYCH--------------ELVSLNLQSCSRIT--DEGVVQICRGCHRLQALCL--------SGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLAR---------NCHELEKMDLEECILITDS-TLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCHERLRVLELDNCLLITDVALEHL-ENCRGLERLELYDCQQVTRAGIKRMAQLPHVKVHAY------- |
8 | 6o60C | 0.20 | 0.15 | 4.64 | 0.82 | EigenThreader | | ---------------------------GLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSN-----------------------------------------------WQFNFQTG-------------------RVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCS-KLKHLDLTSCVSITNSSLKGISEGCRNLEYSWCDQ--ITKDGIEALVRGCRGLKALLL----------------------RGCTQLEQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQ-ALCL---------SGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFTLLARNCHELE------KMDLEECILIT---DSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTCGHRLRVLELDNCLLITDVALEHLE-NCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHAYF----- |
9 | 6o60C | 0.22 | 0.15 | 4.82 | 3.27 | CNFpred | | ------------------------------NKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQ---------------------------------------------------------------GRVVENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTITDSTCYSLS--RFCSKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLR--GCTQLEDEALKHIQN------------YCHELVSLNLQSCSR-ITDEGVVQICRGCHRLQALCLSGC----------SNLTDASLTALGLN-----------------------------CPRLQILEAARCSHLTDAGFTLL-----ARNCHELEKMDLEECILITDSTLIQLSIH--CPKLQALSLSHCELITDDGILHLSNSHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVT |
10 | 4oj5A | 0.04 | 0.03 | 1.62 | 0.83 | DEthreader | | KVSLLLAVREEYTKVGDASLRTQLANGD--EQYNAVGDGIADDTSKLK-EMLSDINN--VKIDLYIEIGLFYAAISL-MV-YRK------------------QP-D-GSYK--------------------GLDIDNGDAI-T-C-ARK-ID--INNLNLVGVKWI-GGAGCASWGSI--HENLRIGAVFIDSNG--GA--A-----VNNAYIAVTQFAGSE---VK--FN---SPIIEDFVHAGR------L-FM--VD-KPHIESSGSGVGLSGQDPD--------------PISGVNMGSQFQF--------------GEVGDIIVKADTLYIDPVNG---------TKPIRELTNIAKICLFRCKSVYLNAGESFEGPGSLKAN--S-F-LIKAGGT-LSLIGLSGIS-TDG-GHMFRVSTVEKVNIH-TNCSVNAGAAYVV--L-SEVQGNIEYRQLFYSVNCSKY-IGATAGQTIAGIMVKTARPTGIDAAPVDGN--VSLTYK-IIE--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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