Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEEVNGDATAGSIPGSTSALLDLSGLDLPPAGTTYPAMPTRPGEQASPEQPSASVSLLDDELMSLGLSDPTPPSGPSLDGTGWNSFQSSDATEPPAPALAQAPSMESRPPAQ |
1 | 1oxzA | 1.00 | 0.48 | 13.54 | 1.35 | SPARKS-K | | VQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEE------------------------------------------------------------------------------------------------------------- |
2 | 1oxzA | 1.00 | 0.48 | 13.54 | 1.07 | MUSTER | | VQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEE------------------------------------------------------------------------------------------------------------- |
3 | 1oxzA | 1.00 | 0.48 | 13.54 | 3.27 | HHsearch | | VQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEE------------------------------------------------------------------------------------------------------------- |
4 | 1oxzA | 1.00 | 0.48 | 13.54 | 1.15 | FFAS-3D | | VQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGEE------------------------------------------------------------------------------------------------------------- |
5 | 6m5rB | 0.06 | 0.04 | 1.90 | 0.83 | DEthreader | | AAPVSEPTVARQKLLALLGQVQTYVFQIELLRRCD---PHIGRGKLPQLKLNALQVRALRRRLRPGLEAQAFLTPLSVTLELLLEYAWREGERLLGSLETFFFTETMGLARPCPYHQLCLVVR-M-CAVFEECVTAN--Q--GATIARLCVVLTF----------------VNGFDTRRPDC-R--------------------------- |
6 | 1wrdA | 0.26 | 0.12 | 3.66 | 1.27 | SPARKS-K | | ---GPLGSEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAE-PADLELLQELNRTCRAMQQRVLELIPQIA-NEQLTEELLIVNDNLNNVFLRHERFERFRTG------------------------------------------------------------------------------------------------------------ |
7 | 5k7vA | 0.10 | 0.10 | 3.66 | 0.76 | MapAlign | | EMIDILAESTEKAVAEAIEEIALATAAIQLIEALAKNLASEEF-MARAISAIAELAKKAIEAIYRLADNH-TTDTFMARAIAAIANLAVTAIAIAALAIAELADNHTTDKFMAAAIEAIALLATLAILAIALLASNHTTEEFMAKAISAIAELAKKAIEAIYREAIEKIARKAIKAIEMLAKNITTEEYKEKAKSAIDEIREKAKEA---- |
8 | 4q25A | 0.05 | 0.05 | 2.37 | 0.56 | CEthreader | | ---SQQFNAELEDVRSHLLAMGGLVEKQVNDAVNALIDADS--GLAQQVREIDDQINQMERNIDEECVRILDLRLIISISKSVIDLERIGDEASKVARRAIQLCEEGESPRGYVEVRHIGSQVQKMVQEALDAFARFDADLALSVAQYDKTVDREYKTALRELVTYMMEDPRAISRVLNIIWALRSLERIGDHARNIAELVIYLVRGT--- |
9 | 1yd8G | 0.53 | 0.23 | 6.71 | 1.06 | MUSTER | | ------GIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQED-SSDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEG--------------------------------------------------------------------------------------------------------------- |
10 | 1yd8G | 0.53 | 0.23 | 6.71 | 3.02 | HHsearch | | ------GIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSS-DGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEG--------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|