Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCCSSCCCCCHHHHHHHHHHHHHHHCCCCCSSSSSSCCCSSSSSHHHHHHHCCHHHHHHHCCCCCCCCCCSSSSCCCCHHHHHHHHHHHCCCSSSSCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC MERPAPLAVLPFSDPAHALSLLRGLSQLRAERKFLDVTLEAAGGRDFPAHRAVLAAASPYFRAMFAGQLRESRAERVRLHGVPPDMLQLLLDFSYTGRVAVSGDNAEPLLRAADLLQFPAVKEACGAFLQQQLDLANCLDMQDFAEAFSCSGLASAAQRFILRHVGELGAEQLERLPLARLLRYLRDDGLCVPKEEAAYQLALRWVRADPPRRAAHWPQLLEAVRLPFVRRFYLLAHVEAEPLVARCPPCLRLLREARDFQAARYDRHDRGPCPRMRPR |
1 | 3i3nB | 0.25 | 0.21 | 6.44 | 1.17 | DEthreader | | ---------------CS-SHCSELSWRQNEQRGLFCDITLCFGGREFRAHRSVLAAATEYFTPL-LSGQFSESRSGRVERGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIQEEFYTLPFHLIRDWLSDLEITV-D-S-EEVLFETVLKWVQERYFEELFKLLR-LSQ-------KPTYLTRHPEVACVKLVADAVERHALR-AE---------------- |
2 | 3i3nB | 0.34 | 0.31 | 9.24 | 1.77 | SPARKS-K | | ------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCF-GGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------------- |
3 | 3i3nB | 0.35 | 0.30 | 9.00 | 1.39 | MapAlign | | ----------------HCSELSWRQNEQRRQGLFCDITLCFG-GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEEPGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAA-DIRRNFHKVIDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQK-PTYLTRHVKPERLVANNEVCVKLVADAVERHALR--------------- |
4 | 3i3nB | 0.33 | 0.30 | 9.05 | 1.10 | CEthreader | | ------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCF-GGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------------- |
5 | 3i3nB | 0.32 | 0.29 | 8.85 | 1.74 | MUSTER | | ------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCF-GGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEYYT-GRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHY-TLSQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------------- |
6 | 3i3nB | 0.34 | 0.31 | 9.24 | 3.33 | HHsearch | | ------SEAEDFECSSHCSELSWRQNEQRRQGLFCDITLC-FGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKGPEPDTVEAVIEY-YTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAAD-IRRNFHKVIDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQ-KPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------------- |
7 | 3i3nB | 0.32 | 0.29 | 8.76 | 2.70 | FFAS-3D | | -------EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCF-GGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKWSSEPDTVEAVIEYYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAH-YTLSQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQK-PTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE------------- |
8 | 3i3nB | 0.29 | 0.26 | 7.97 | 1.65 | EigenThreader | | ----SEAEDFECSSHCSE--LSWRQNEQRRQGLFCDITLCFG-GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVERKWPEPDTVEAVIEYYTG-RIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHY-TLSQLALKAADIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQKPTYLTRH-----VLVANNEVCVKLVADAVERHALRAE------------- |
9 | 4ap2A | 0.33 | 0.30 | 9.14 | 1.72 | CNFpred | | -------EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCF--GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALR--------------- |
10 | 6i2mA | 0.23 | 0.16 | 5.05 | 1.00 | DEthreader | | -------------M-NNSSELIAVINGFRNSGRFCDISIVI-NDERINAHKLILSGASEYFSILFSNNFIDSNEYEVNLSHLDYQSVNDLIDYIYGIPLSLTNDNVKYILSTADFLQIGSAITECENYILKNLCSKNCIDFYIYADKYNNKKIESASFNTILQNILRLINENFKYLTEESMIKILSDDMLNIKNEDFAPLILIKWLESTQ--------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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