Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCSSSSSSSSCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCSSCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSSSSSCCCCCCCCCSSSSSSSSCCCCCCCCCCCSSSSCCCCCCCCCCCCCCSSSSSSSSSCCCCCCCCCC MFNGEPGPASSGASRNVVRSSSISGEICGSQQAGGGAGTTTAKKRRSSLGAKMVAIVGLTQWSKSTLQLPQPEGATKKLRSNIRRSTETGIAVEMRSRVTRQGSRESTDGSTNSNSSDGTFIFPTTRLGAESQFSDFLDGLGPAQIVGRQTLATPPMGDVHIAIMDRSGQLEVEVIEARGLTPKPGSKSLPATYIKVYLLENGACLAKKKTKMTKKTCDPLYQQALLFDEGPQGKVLQVIVWGDYGRMDHKCFMGMAQIMLDELDLSAAVTGWYKLFPTSSVADSTLGSLTRRLSQSSLESATSPSCS |
1 | 6l7eA | 0.10 | 0.07 | 2.51 | 0.83 | DEthreader | | IFPYRLFIAKFTV-PTIL---------------------------------KYYMQIHAETALILNAPIT-D-----TDHDNIGKLLDI-----------SRSAALSTYYIRKSRDDL------YVNRALENENANSGVISR------GWGDYYSMVYNGDITINYKALKIYISPKLR-IIHNGCMLDTAIPKVQIIVKAG---GKEQTFTADVIQPPEMNYQFALEIDGSGLNASIDVTFTAFAED-GRKLGYESFSIPVTLK-----------------------LD---ADSA-VAL-Q------ |
2 | 2q3xB | 0.71 | 0.32 | 9.22 | 1.46 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------SPGPAQLVGRQTLATPA-GDIQIG-EDKKGQLEVEVIRARSLTQKPST---PAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYDH---KCF-GVAQILLEELDLSSV-IGWYKLFPPSSLVDPTLAP------------------- |
3 | 2r83A | 0.14 | 0.12 | 4.00 | 0.95 | MapAlign | | ----------------------KLGKLQYSLDYDFQNNQLLVGIIQAA--ELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVAGKLTVVILEAKNLKKM-DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVQIQKVQVVVTVLDYD-KIGKNDAIGKVFVGYMLANPRRPIAQWHTLQVEEEVDAM----------------------- |
4 | 2r83A | 0.15 | 0.13 | 4.36 | 0.56 | CEthreader | | ---------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKM-DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVQIQKVQVVVTVLD-YDKIGKNDAIGKVFVGYNSTNPRRPIAQWHTLQVEEEVDAMLA--------------------- |
5 | 2r83A | 0.13 | 0.09 | 3.06 | 0.80 | EigenThreader | | QNNLPALDMGGTSDPYVKFLLP--DKKKKFETKVHRKTLNPEQFTFK-------------------------VPYSELAGKTLVMAVYDFD----------------RFSKHDNTVDFGH-------------------------VLQSAEKEEQEKLGDIFSLRYVPGKLTVVILEAKNLKKM-DVGGLSDPYVKIHLN--GKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQVVVTVLDYDKIGKNDAIGKVFVGYMLANPRRPIAQWHTLQVEEEVDAMLA---------------------- |
6 | 2q3xB | 0.72 | 0.33 | 9.31 | 1.05 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------------SPGPAQLVGRQTLATPA-GDIQIGEDKK-GQLEVEVIRARSLTQKPST---PAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYD---HKCF-GVAQILLEELDLSS-VIGWYKLFPPSSLVDPTLAP------------------- |
7 | 2r83A | 0.15 | 0.12 | 3.94 | 1.32 | SPARKS-K | | ---------------------------------------------EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNKVPYSELAGKTLVYDFDRFSKHDIIGEFMNTVDFGHLQSAEKEEQEKLGDICFSLRYVAGKLTVVILEAKNLKKMDV-GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQVQVVVTVLDY-DKIGKNDAIGKVFVGYNSTNPRRPIAQWHTLQVEEEVDAMLA--------------------- |
8 | 2q3xB | 0.74 | 0.33 | 9.48 | 1.75 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------SPGPAQLVGRQTLATPA-GDIQIG-EDKKGQLEVEVIRARSLTQKP---STPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYD---HKCF-GVAQILLEELDLSS-VIGWYKLFPPSSLVDPTLAP------------------- |
9 | 6btyA | 0.29 | 0.11 | 3.36 | 1.60 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------GAVKLSISYRNGTLFIMVMHIKDLVTEDGAD--PNPYVKTYLLPDNHKTSKRKTKISRKTRNPTFNEMLVYSGYSRQRELQLSVL-SAESLRENFFLGGVTLPLKDFNLSKETVKWYQL-------------------------------- |
10 | 2q3xA | 0.75 | 0.33 | 9.29 | 2.38 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------SPGPAQLVGRQ-----AMGDIQIGMEDKKGQLEVEVIRARSLTQKP---STPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSL-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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