>Q9UJ72 (88 residues) MFCGDYVQGTIFPAPNFNPIMDAQMLGGALQGFDCDKDMLINILTQRCNAQRMMIAEAYQ SMYGRDLIGDMREQLSDHFKDVMAGLMY |
Sequence |
20 40 60 80 | | | | MFCGDYVQGTIFPAPNFNPIMDAQMLGGALQGFDCDKDMLINILTQRCNAQRMMIAEAYQSMYGRDLIGDMREQLSDHFKDVMAGLMY |
Prediction | CCCCCCCCCCSSCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHC |
Confidence | 9999875454316999998999999999981579967999999965999999999999999979868999998668259999999719 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | MFCGDYVQGTIFPAPNFNPIMDAQMLGGALQGFDCDKDMLINILTQRCNAQRMMIAEAYQSMYGRDLIGDMREQLSDHFKDVMAGLMY |
Prediction | 7364742402032466141640063025005434354410030015344620440263057427550263047403441340002115 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCSSCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHC MFCGDYVQGTIFPAPNFNPIMDAQMLGGALQGFDCDKDMLINILTQRCNAQRMMIAEAYQSMYGRDLIGDMREQLSDHFKDVMAGLMY | |||||||||||||||||||
1 | 4mduA | 0.31 | 0.31 | 9.26 | 1.50 | DEthreader | -HGKHYRP-TIKPTTGFSASADAERLHRSMKGPGTNELAIINILARRTNYERQEICQSYKSLYKQDLKDDLKSDTSGDFRKVLCQLIV | |||||||||||||
2 | 1dm5A2 | 0.33 | 0.31 | 9.23 | 2.26 | SPARKS-K | -----VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLR | |||||||||||||
3 | 1axnA2 | 0.41 | 0.36 | 10.70 | 0.84 | MapAlign | ----------VRDYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVT | |||||||||||||
4 | 1axnA2 | 0.39 | 0.39 | 11.43 | 0.57 | CEthreader | ASIWVGHRGTVRDYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVT | |||||||||||||
5 | 1bc0A | 0.37 | 0.35 | 10.45 | 1.41 | MUSTER | -----ALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVALMK | |||||||||||||
6 | 1dm5A | 0.33 | 0.31 | 9.23 | 1.40 | HHsearch | -----VVQGTVKPHASFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLR | |||||||||||||
7 | 1xjlA1 | 0.33 | 0.31 | 9.22 | 1.49 | FFAS-3D | -----SAYGSVKAYTNFDAERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHLETVILGLL- | |||||||||||||
8 | 1hm6A | 0.31 | 0.31 | 9.28 | 0.97 | EigenThreader | KGSKGGPGSAVSPYPTFNPSSDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIKAAYLQEKGKPLDEALKKALTGHLEEVALALLK | |||||||||||||
9 | 1bc0A | 0.38 | 0.35 | 10.44 | 1.03 | CNFpred | ------LRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVALMK | |||||||||||||
10 | 1dm5A2 | 0.28 | 0.26 | 8.00 | 1.33 | DEthreader | ----VVQGTVKPHA-SFNSREDAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEAAALALLR | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |