Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCHHHHHHHCCCCCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCSCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSCHHHHHHHHHHHHHHHHSSSSCCCCCCCCCCCCSSSSHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC MVNLTSMSGFLLMGFSDERKLQILHALVFLVTYLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPLHYETIMDPRACRHAVIAVWIAGGLSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKLACSYEFINEIALAAFTTSAAFICLISIVLSYIRIFSTVLRIPSAEGRTKVFSTCLPHLFVATFFLSAAGFEFLRLPSDSSSTVDLVFSVFYTVIPPTLNPVIYSLRNDSMKAALRKMLSKEELPQRKMCLKAMFKL |
1 | 2ks9A | 0.18 | 0.17 | 5.49 | 1.33 | DEthreader | | ------TNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QPRLSATATKVVICVIWVLALLLAFPQGYYST-T-E-----PSRVVCMIEW-PE-H-PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWSESDREVSAKRKVVKMMIVVVCTFAICWLPFHIFFLPPDYFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFYLQTGSVYKVSRL |
2 | 4n6hA2 | 0.18 | 0.16 | 5.19 | 2.13 | SPARKS-K | | ---------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDG---AVVCMLQFPS------PSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------- |
3 | 2ziyA | 0.16 | 0.15 | 4.98 | 0.68 | MapAlign | | -WYNPSIIVHPHWFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGW----GAYTLEGVLCNCSF-----DYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVAQPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTLTCCQFDDKET-------- |
4 | 3dqbA | 0.16 | 0.15 | 4.97 | 0.38 | CEthreader | | KTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLV----GWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVH---FIIPLIVIFFCYGQLVFTVKEAAATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------- |
5 | 1f88A | 0.16 | 0.15 | 5.09 | 1.44 | MUSTER | | KTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALACAAPPLVG----WSRYIPEGMQCSCGI---DYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAASATTQKAEKEVTRMVIIMVIAFLICWLPYA-HQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPSTTVSKTETSQV |
6 | 4djhA | 0.18 | 0.16 | 5.17 | 1.65 | HHsearch | | -----------------SPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTT-TMPFQSTVYLMNSWPFGDVLCKIVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVRE---DVDVIECSLQFPD---DDYSWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKSVRLEKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEASAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP---------------- |
7 | 3emlA1 | 0.17 | 0.15 | 4.82 | 2.24 | FFAS-3D | | ---------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMN---------YMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ----------- |
8 | 2ks9A | 0.16 | 0.15 | 5.08 | 0.98 | EigenThreader | | LSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQG-----YYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGIT-----LRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKS |
9 | 4ww3A | 0.16 | 0.15 | 4.86 | 1.71 | CNFpred | | --------------------VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE----GVLCNCSFDY-----ISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLA-WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDK |
10 | 2hpyA | 0.16 | 0.15 | 5.08 | 1.33 | DEthreader | | --GPNFYRSPFPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKMSNFR--FGENHAIMGVAFTWVMALACAAPPLGWSRY--I----EGMQCSCGIDY-YT-P-HEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQEQKAEKETRMVIIMVIAFLICWLPYAGVAFYISDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNVSKTETSQ-VAPA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|